Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1868 |
Symbol | |
ID | 4173053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2260647 |
End bp | 2261804 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054877 |
Product | hypothetical protein |
Protein accession | YP_661442 |
Protein GI | 109898187 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAT TAACGAAATT TGGCCTCTTG TCAGTGGCGA TCGCTTCTTC TTTCAGTGCT GCGGCTAAAA TAGACATATA CGAAAACGAC GGTTTGAGCT TCAGCGCTGA CGGCTTGGTC AATGCTTTCT ATTCCAATAG TTCAATTGAA ACCACCGATG CAGGCGGGGT CGGTACTGAC AGAGATCAAT CTCGAGTACG TATGGGGTTT TTACCGAATA ATGTAGGCTT TAACTTTTCA AATCAGTTAT CAGACATGAA GATTGAAATG CGCTCTTCTT TTTGGGTGTC CATAAACGAT TCTGATAATA ATCGGGACGC CTCTCCCGCT GATTTAGGGA CCGGCTCGTT GATTGACGTT CGCCAATTTT ATGCAACAGT CAAAGCCGAT TGGGGGGAAG TGCTTATCGG TAAAGACTTC GGTCTGTTTA ACCGCGCCAA TATTTTAAAC GATGAATTGC TCTTGGGCTT TGGCCAAACC TCTGACTTTT TTGGTCTAGT CGATGGCGGT AATGTGACAT TCGGTAACAT TAGTACTGGC TATACGTATC CTTTCCCTAA GGCGCAGATC ACTTATAGGT CGCCTGAATT CAATGGTTTC AAAATTGCGG TGGGCCTGAT GGACCCTAAC AAAGTGTCAT CTGATTCTTC TGAAGATTTA CCGCGTTTTG AGGCCGAATT AATGTACAAC TCCACGTTTG ACAGTGGCTC ATTTATGGCG TGGTTAAGTG GTGTTAGCCA ATCCAGTGAA GTTGATGGAA TAGAACAAGA TCAATCAGGC GTGGGCTATG GTGCGAAAGT AAAGTTTGCG GGCTTGGCAC TGAGTGCGTC GGGGTATAGC ACTAAAGGCT TAGGGCATGT TGCAGGGCTA GATCAGTTGG TTGGCCCTGA GGTGATCGAG ACTGACGGTA TGTTATTTCA AGCGTCTTAT ACCCTGCACG ACCATAGATT TGTTGTCACC CACGGCAGAA CTGAAGTGGA AAACACTGAC AGTGTATTGG ATGCCGAACA TACCAATACG GGGTTGGCTT ATTTCAATAC GCTGCGCCCG GGACTCACCG CCGTTTTCGA ATACAACCAC ACTGAAGCAG ACGTAACGAA TTCTTTGGCA GGGGAGGACA ATGACACGGT TTCTGTTGGT GCCGTGGTGA CATTTTAA
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Protein sequence | MNTLTKFGLL SVAIASSFSA AAKIDIYEND GLSFSADGLV NAFYSNSSIE TTDAGGVGTD RDQSRVRMGF LPNNVGFNFS NQLSDMKIEM RSSFWVSIND SDNNRDASPA DLGTGSLIDV RQFYATVKAD WGEVLIGKDF GLFNRANILN DELLLGFGQT SDFFGLVDGG NVTFGNISTG YTYPFPKAQI TYRSPEFNGF KIAVGLMDPN KVSSDSSEDL PRFEAELMYN STFDSGSFMA WLSGVSQSSE VDGIEQDQSG VGYGAKVKFA GLALSASGYS TKGLGHVAGL DQLVGPEVIE TDGMLFQASY TLHDHRFVVT HGRTEVENTD SVLDAEHTNT GLAYFNTLRP GLTAVFEYNH TEADVTNSLA GEDNDTVSVG AVVTF
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