Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1841 |
Symbol | |
ID | 4173026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2228429 |
End bp | 2230093 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054850 |
Product | sulfatase |
Protein accession | YP_661415 |
Protein GI | 109898160 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCT CAGCAGCGCA TGAGTCAGCA ATAGCTAAGT GTGTTGGTTG TATCCTTCGC GTAAGAAAAA GAACAGGGGG CTTAGCGGTA TGCTTGCTCT GTTGTTTTAT TCTCCTTCGC TCGGCGTTAA CACGGCGGGT AGTGGATGTG CCACGCAAAT CAGTAGGGTT GTTTATCGTG AAATGCATTA AAGCGCATAT TCTGTGCATC ATTACCTTGG TGCTTTGTGC AGCAACCGTT GCTGCACAAA GCGAGCAAAG TAAGAATAAC CTAGTTAACA GGCCAAATGT GGTAATGATT GTGGCAGATG ATCACGGGTT AGATGCCATA GGGGCATACG GCAATAACGT GATCCAAACC CCAAATATCG ATGCGCTGGC AAGAGAGGGC GCTCGGTTTG TGAATGCGTT TGCCACTGTG TCAAGTTGTA GCCCTAGTCG CTCAGTTATG TTAACCGGTC AACATAATCA CACCAATGGG ATGTATGGCT TGCAGCATAA GCAGCACCAT TTCAGTAGTT TTGATGACGT GCAATCATTG CCGGTCACGC TCAGTGAAAA CGGCTATCGA ACAGCCAGAA TAGGTAAATA TCACTTAGGG CCAAACAGCG TATTTAAATT TGATGACGTG TTATCAGAAG GCGCAGCCAA TGATATGACC TCAATCGCAC GCAGCCCAGT TGAAATGGCT CAAAAAAGCG AAGCATTTAT CCGTCGCGAC AGCGCGCCGT TCTTTTTGTA TTTTGCCAGT GACGACCCGC ATCGAGGTTA CCCGTTTGAG ACCTATCCCG AGCCAAACCG ATTTGGTAAC CGTGAACAGG GGTACCCGGG CATCGAAGAG GTCGTGTATC AGCCTGATGA CGTGTTGGTG CCACCGTACT TACCCGACAC ACCCGCTGCA CAAAAAGAAA TAGCTCAATA CTATCAGGCT ATCTCTCGTC TTGACCAAGG TGTAGGCAAG CTGGTTGAAA TACTCAAAGC ACAGGGTAAA TACGACAACA CGTTAATTTT GTATTTGTCA GATAATGGCA TTGCATTTCC TGGTGCGAAA ACCAATTTGT ACGATGCAGG TATTCATCTG CCGTTAATTG TCAAAGCGCC AGCGCAGAAA AATAACGCTG TTTCCTGTAC AAAAAACATT CAAAACTGTA CCCGTCACCA TCAGTTGGTC TCTTGGCTTG ATTTAACCCC GACTATTTTA GATTACGCAA ACGTTAAACC AATGACGACC ACTGTTCAGG GCAAATCATT CAAAGCAATT TTAGAAAACG AACAGCCTAA AGGCTGGGAA CATGTATATG CCTCTCACAC CATGCACGAA GTGATGATGT ATTACCCCAT GCGCATGGTT AGAACCAAGC AATATAAGTT GATTTGGAAT ATTGCCCATG AGCTAAGTTA CCCCTTTGCT GCGGACTTGC AGCAGTCCTT AATCTGGCAA GATGTGCGTC GCCGCGGAAA CACTCAATAT GCGGGTCGCC AGATCGAGGA CTTTTTACAT CGCCCTGAGT TTGAGTTGTT TGATATGCAA AACGACCCTC AAGAGCAGCA TAATCTCGCT GACTTACCCC AGTTCAGTCG TGTAAAACAT GAACTCATAC ACCAGCTTAA AATATTTCAA CAAGAGACTC AGGATCCTTG GATCGCTAAA TGGCACTACC AGTAA
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Protein sequence | MDASAAHESA IAKCVGCILR VRKRTGGLAV CLLCCFILLR SALTRRVVDV PRKSVGLFIV KCIKAHILCI ITLVLCAATV AAQSEQSKNN LVNRPNVVMI VADDHGLDAI GAYGNNVIQT PNIDALAREG ARFVNAFATV SSCSPSRSVM LTGQHNHTNG MYGLQHKQHH FSSFDDVQSL PVTLSENGYR TARIGKYHLG PNSVFKFDDV LSEGAANDMT SIARSPVEMA QKSEAFIRRD SAPFFLYFAS DDPHRGYPFE TYPEPNRFGN REQGYPGIEE VVYQPDDVLV PPYLPDTPAA QKEIAQYYQA ISRLDQGVGK LVEILKAQGK YDNTLILYLS DNGIAFPGAK TNLYDAGIHL PLIVKAPAQK NNAVSCTKNI QNCTRHHQLV SWLDLTPTIL DYANVKPMTT TVQGKSFKAI LENEQPKGWE HVYASHTMHE VMMYYPMRMV RTKQYKLIWN IAHELSYPFA ADLQQSLIWQ DVRRRGNTQY AGRQIEDFLH RPEFELFDMQ NDPQEQHNLA DLPQFSRVKH ELIHQLKIFQ QETQDPWIAK WHYQ
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