Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1808 |
Symbol | |
ID | 4172056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2172537 |
End bp | 2173541 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054818 |
Product | luciferase-like |
Protein accession | YP_661383 |
Protein GI | 109898128 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGTA CCACTGCGTT TTCAATTTTA GATTTAGCCC CCATTGTGCA AGGGCAAAAC ATTTCTCAGA CACTCGAAAA CAGTCGTCAG ATGGCGGTGC AAGCAGAGCA ATTGGGTTAC AACCGAGTTT GGTTAGCGGA GCATCATGGT ATGCGCGGTG TCGGCAGTTC AGCTACTTCG GTGGTGCTTG GTCACATTGG CGCTGCCACC CGCAAGATTC GGATAGGATC CGGTGGCGTC ATGTTACCTA ACCATTCCCC GCTTATCATT GCCGAACAAT TTGGTACCTT GGCTGCACTT TTCCCTGACA GGGTTGACTT AGGATTGGGA CGTGCACCAG GCACGGACAT GGCAACAGCA AGAGCGTTAA GACGTAATAT GCAAGCCAGT GTGGAAGACT ACCCTAATGA TATTCGCGCC CTGCAAGCTT ATTTAGGAAC ACCAAGTGCT GAGCAAGCGA TCCTCGCTAT TCCAGGTTGT GACAGTCACG TGCCACTGTG GTTACTTGGT TCGAGTTTAT ACAGTGCCCA ATTAGCAGCA CAATTTGGTT TGCCTTATTC ATTTGCGTCC CATTTCGCAC CAGATGCTTT ATTTGATGCA TTGAATATAT ATCGCGGCCA GTTCAAACCG TCAGTGCAAT TAGATCAGCC TTACACGATG GCAGGTGTGA TGGCTGTTAT TGCTGACACA GATGAAGAAG CACAATACTT ATATACCTCA TTACAACAAC AATTTGCTAA TTTGCGCCGA GGGGCGAACA AGCCATTCGC AAGGCCAGTT GATGAGATCA CTGCCGTGTG CAGCCCGGCG GAACTGTCAA TGATTGCTCA CACATTACAG TATGCCATTG TTGGCTCTGC CGAGACTGCA CATTCCCAAT TAGCACGATT CATTGAGAAC ACTAGGGTAG ATGAGGTGAT TTTTTCCTTT CCCATACATG ATCAAAACGC TCGTTTGCAC AGTATGAAAT TGTTAGCAGA GAGTCAAAAT ATGGCGAAAG CCTAG
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Protein sequence | MTGTTAFSIL DLAPIVQGQN ISQTLENSRQ MAVQAEQLGY NRVWLAEHHG MRGVGSSATS VVLGHIGAAT RKIRIGSGGV MLPNHSPLII AEQFGTLAAL FPDRVDLGLG RAPGTDMATA RALRRNMQAS VEDYPNDIRA LQAYLGTPSA EQAILAIPGC DSHVPLWLLG SSLYSAQLAA QFGLPYSFAS HFAPDALFDA LNIYRGQFKP SVQLDQPYTM AGVMAVIADT DEEAQYLYTS LQQQFANLRR GANKPFARPV DEITAVCSPA ELSMIAHTLQ YAIVGSAETA HSQLARFIEN TRVDEVIFSF PIHDQNARLH SMKLLAESQN MAKA
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