Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1802 |
Symbol | |
ID | 4172050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2163953 |
End bp | 2164825 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054812 |
Product | succinyl-CoA synthetase, alpha subunit |
Protein accession | YP_661377 |
Protein GI | 109898122 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.155061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAC TAATCGACAA AAACACCAAG GTAATCTGTC AAGGTTTCAC TGGTGGACAA GGTACTTTCC ACTCAGAACA AGCTATCGAA TACGGTACGC AAATGGTCGG TGGTGTTACG CCTGGTAAAG GCGGCACAAC TCATCTTGGT TTGCCTGTTT TCAATACAGT ACGTGAAGCG GTTCAAGAAA CAGGCGCTAC TGCGACTGTT ATCTATGTAC CAGCGCCTTT CTGTAAAGAC TCTATCGTTG AAGCTGCAGA TGCAGGTATC GAATTGATCG TTTGTATCAC TGAAGGTATC CCTACGCTTG ATATGCTTTA CGTTAAAGAA TACGTAAATC GTAAAGGCGT GCGTATGATC GGTCCTAACT GCCCAGGTGT TATCACCCCA GGCGAGTGTA AGATTGGCAT CATGCCTGGT CACATTCACA AGCCAGGTAA AGTCGGTATC GTTTCTCGCT CTGGTACGTT GACGTATGAA GCTGTTAAGC AAACAACAGA TGAAGGTTTC GGCCAGTCTA CGTGTGTTGG TATCGGTGGC GACCCTATCC CAGGCTCTAA CTTCATTGAC ATCCTACAGA TGTTCCAAGA CGATCCTAAG ACTGAAGCAA TCGTAATGAT TGGTGAAATC GGCGGAACGG CTGAAGAAGA AGCAGCTGCA TTCATCAAAG CTAACATCAC TAAACCTGTT GTTTCTTACA TTGCTGGTGT AACTGCTCCT GCTGGTAAGC GCATGGGTCA TGCTGGTGCG ATTATCTCTG GTGGTAAAGG TACTGCTGAC GACAAATTTA AAGCACTTGA AGATGCAGGC GTTAAGACTG TTCGCTCACT TGCTGACATT GGTCAAGGTC TTCGCGAAAT TACCGGTTGG TAA
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Protein sequence | MSVLIDKNTK VICQGFTGGQ GTFHSEQAIE YGTQMVGGVT PGKGGTTHLG LPVFNTVREA VQETGATATV IYVPAPFCKD SIVEAADAGI ELIVCITEGI PTLDMLYVKE YVNRKGVRMI GPNCPGVITP GECKIGIMPG HIHKPGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG DPIPGSNFID ILQMFQDDPK TEAIVMIGEI GGTAEEEAAA FIKANITKPV VSYIAGVTAP AGKRMGHAGA IISGGKGTAD DKFKALEDAG VKTVRSLADI GQGLREITGW
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