Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1792 |
Symbol | |
ID | 4172040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2150274 |
End bp | 2151695 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054802 |
Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
Protein accession | YP_661367 |
Protein GI | 109898112 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG0836] Mannose-1-phosphate guanylyltransferase |
TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.163153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCAG TCGTTTTAGC CGGTGGTAGC GGAAGCCGTT TATGGCCAAA ATCTCGTGCG GCATTGCCTA AGCAGTTTTT ACGCTTAACG TCGAATTTGA CGATGTTGCA AGATACTGTT GCGCGCTTAG AGGGGACTCA AGCAGAACAA CCTATCGTCA TTTGTAACGA TTCTCATCGC TTTCTTGTCG CAGAGCAGTT ACGCCAGCAA AACATAGAGC ACGGTGGCAT TTTATTAGAG CCTATGGGGC GCAACACCGC TCCTGCGATT GCACTCGCTG CGTTACATGC CTCGCTAAAG GGGGAAGACC CTACCTTGTT GGTACTTGCT GCGGATCATT TGATCAATGA TAACAAAGCG TTTCATAAAG CCATTGCCCA AGCCGAAGTG CTGGCAGAGC AGGGTAAGTT AGTCACATTC GGCATAGTGC CAGACAGCGC GCATACGGGT TACGGCTATA TTCGTAGCGG TGCAAAAGTA GCGCAAGCAG AAGTGGGCTT TGATGTGGCT GAGTTTGTTG AGAAACCTGA CTTGGCTACG GCGCAGCAAT ATGTAGACTC AGGGAACTAT TTCTGGAACA GCGGTATGTT TTTATTTAAG GCGAGCCGTT ATTTAGAAGA ACTCGAAAAG TACGCCCCCG ACATGTTGGA TATCTGTAAA CGTGCGATTG CGACAGAAGC CCCAGATTTA GAATTCGTGC GGGTTGATGC AGATATATTT GCTACATGCC CTGATGATTC TATCGATTAC GCTGTAATGG AAAAGACTGA TTCAGCCGCT GTTGTGCCAT TAGATGCAGG TTGGAGCGAC GTGGGCAGTT GGTCTTCCTT ATGGGAAACA GCAAAAGAAA AAGATGAAAA TCAAAACGTG ATCATCGGTG ATGCGATATT AGATGACGTT CACAACAGTT ATATTAACGC TGAGCAGCGC CTTATTTCGG TGGTTGGCTT AGATGATGTC GTTGTGGTTG AGACCAAAGA TGCGGTTTTG GTTGCCCACA AAGATAAAGT ACAAAATATC AAAAATGTAG TGAACAAACT TAAAGCGGAA AAACGACCAG AGTTTGAATT TCACCGCGAA GTATTCCGTC CATGGGGCAG TTACGACTCA ATCGATAACG GTGAACGTTT TCAAGTGAAG CGTATTACGG TTAAACCGGG AGAAAAGCTT TCCGTGCAAA TGCATCATCA CAGAGCAGAG CACTGGATCG TAGTAGCGGG CACGGCCAAA GTCACCAACG GTGAAGAAAC CTTACTGTTA TGCGAAAACC AATCAACTTA TATCCCGGTT GGCGTTATTC ACGCATTAGA AAACCCAGGA AAAATCCCTT TAGAGCTTAT TGAAGTGCAA TCAGGTACCT ACTTGGGCGA AGACGACATT GTGCGTTTTT CTGATCGCTA CGGTCGCGTT GAGTCTAAAT AA
|
Protein sequence | MKPVVLAGGS GSRLWPKSRA ALPKQFLRLT SNLTMLQDTV ARLEGTQAEQ PIVICNDSHR FLVAEQLRQQ NIEHGGILLE PMGRNTAPAI ALAALHASLK GEDPTLLVLA ADHLINDNKA FHKAIAQAEV LAEQGKLVTF GIVPDSAHTG YGYIRSGAKV AQAEVGFDVA EFVEKPDLAT AQQYVDSGNY FWNSGMFLFK ASRYLEELEK YAPDMLDICK RAIATEAPDL EFVRVDADIF ATCPDDSIDY AVMEKTDSAA VVPLDAGWSD VGSWSSLWET AKEKDENQNV IIGDAILDDV HNSYINAEQR LISVVGLDDV VVVETKDAVL VAHKDKVQNI KNVVNKLKAE KRPEFEFHRE VFRPWGSYDS IDNGERFQVK RITVKPGEKL SVQMHHHRAE HWIVVAGTAK VTNGEETLLL CENQSTYIPV GVIHALENPG KIPLELIEVQ SGTYLGEDDI VRFSDRYGRV ESK
|
| |