Gene Patl_1755 details

Gene Information

• Locus tag: Patl_1755
• ID: 4173684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2099975
• End bp: 2100631
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638054765
• Product: redoxin
• Protein accession: YP_661330
• Protein GI: 109898075
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACTT TAAAAGAACA AACCGAGGCG CAAGTCGCGA AATCACGACA AGCCAAACCT 
GAATTTATGC AAGCGATGGA TGAGTTAATG GCCAAAGCTC ATGAGTTTGA GCAAGGCAGC 
GAGGCTATCG AAATCGGCCA GCAGGCGCCA ACATTCACGT TGCCAAATGC CCAAGGTCAA 
GACGTGGCGT TATCCTATTT GCGCACGAAA GGCCCAGTAG TGGCCACGTT TTATCGCGGC 
GACTGGTGCC CTTATTGTAA TTTACAGCTA AGAGCCCTTC AGTCGATATT GGGTGACATT 
CACGAATTAG GCGCTGAATT AGTCGCTATA AGCCCGCAAG TGCCCGACGA CAGCTTAAGT 
AAAAGTGAGA TAAGTGAATT AGGGTTTCAT GTGTTATCAG ATCAGGATGC CCGCGTAGCT 
GCGTCCTATG GTGTGGCGTG GGAAGTACCC GAGCTAATAT TACAGCATAT GCGTAAAGAT 
CGCGGTTTAG ACTTAGCCAG CATCAATAAT GGTAATGGCA GCATGCTACC TATTCCCGCC 
ACATTCGTAT TAAATGCCGA CGCTAAAGTG ATTTGGCGCT TTGTGGATGT AGATTACCGC 
ACCCGTGCAG AGCCAGCAGA CATCATTGCG GCGTTGAAGG CAAATCAAAT TACCTAA 

 

Protein sequence

MSTLKEQTEA QVAKSRQAKP EFMQAMDELM AKAHEFEQGS EAIEIGQQAP TFTLPNAQGQ 
DVALSYLRTK GPVVATFYRG DWCPYCNLQL RALQSILGDI HELGAELVAI SPQVPDDSLS 
KSEISELGFH VLSDQDARVA ASYGVAWEVP ELILQHMRKD RGLDLASINN GNGSMLPIPA 
TFVLNADAKV IWRFVDVDYR TRAEPADIIA ALKANQIT