| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1750 |
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| Symbol | |
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| ID | 4173679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2093787 |
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| End bp | 2095769 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054760 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_661325 |
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| Protein GI | 109898070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTATA CGCCTCAATC CAAATCCGCT TTAAATTTTA TCGCCGGCGG CGGGGAAATG
GGCGCTAGAA TACGCGCATA CGATTGGCAG TCCTCCCCGA TTGGACAGCC CGAAGATTGG
CCGCAATCTT TAAAAACCAG CGTAAGACTG CTGTTATCCA GTGGCCATCC CATGTTTATT
TGGTGGGGTG AACATCTTAT TCAATTTTAC AATGACGCTT ACGCCAGTAC GCTAGGCCCA
GAACGCCATC CCAGTGCGTT AGGCCAACAA GGCCGAGACT GTTGGGCCGA AATTTGGCCT
GAAATCGCCC CGCAAATGGA GCAGGTTTTA ACTGGAAAAG GCCACACTTG GCACGAGAAC
CAACGTTTGT TCATTACACG TAATGGTGTG CGTGAAGAAA TGTATTGGAC CTATAGTTAC
AGCCCAATTG ACGATCCAAA TTCGGCAAAC GGCATCGGTG GTGTTTTAGT CGTGTGTAAC
GAGACAACCG AGCAGGTGTT AGCAGAGCAC GCCATGAAAA CGGCCGAAGC TCGTTGGCGC
TCATTGTTCG ACCAAGCTCC CAGTTTTATG TGCATAGTGC AAGGGCCTGA ACACCGCTTT
GAATACGCCA ATCTCAACTA CTTCAAACTA CTAGGCAAAC AAGATTTTCT AGGCGAAAAG
GTAATTGACG TTGTTCCTGA GGTCGACGCT CAAGGGTTTA TCGCCCTACT AGACAAGGTC
TTTGAAAGCG GTGAAAGCCA CCACGGTATT GAAATGCCCC TCGTTGTGGG CAATGGTGCC
CCTATCTATA TCGACTTTAT TTATCAGCCA ATAATGAACG CGAGCGGTCA CGTCAGCGGA
ATATTAGTAG AGGGCAATAA TGTCACCGAG CGCGTTATGG CGAATCGTTC ACTGCAGGAA
CAAGACAAGC TTAAAGACGA ATTTCTCGCC ATGCTAGCCC ACGAGTTACG TAATCCATTA
GCCCCTATTC GCAATGTGAG CGAAATATTG CTCAACATGG AGCAACGCGA TCCAAAGCTA
AAAAACATCG GTGATATTCT GGCCCGCCAA GTACGTCACA TGACTCACCT CATGGATGAC
TTACTGGATG TGTCTCGTAT CAGTCAAAAC CTAATCAATT TGCAGCTTGA ACCTACCAAC
TTCTCTGATA TCGTCGATTT AACCATAGAA TCTCAGCAAA GTGCGCTGGA TACCAAACAA
CATACTCTTG AGGTAGTCGA TACCCCGCAA GATTTATATG TTAACGGCGA CAGCACTCGC
TTGGTTCAAT CTTTAAGCAA CGTGTTGAAC AACGCCATTA AATACACTCC TGAGGGTGGC
CACATTACAC TTGAGTGTGT GGCAGACATT GAAACTGTGC AGGTGATTAT TAGTGACAAT
GGCTACGGAA TTTGCCCTTC GATGCAGGGT AAGGTGTTTG AACTTTTTGC CCAAGTACAG
CAAACGTTAG ATCGCTCCCA AGGTGGCTTG GGTATTGGTC TAAATATCGT TCAGCGTTTA
GTGCAAATGC ATGGCGGGTC CATCTCGGTG AGTAGCCAAG GTCTGGGTCA TGGTTCATGC
TTTACCATTA CCTTGCCTAG AATAACCGCC CCTCAAAAAA TGGCTGCCGA GGCCGCATTT
GCCCTAAAAG CAGAGAAACG AATTTTGATA GTCGATGACA ACAAAGATTC TGCGGATACT
CTATCAGAGT TATTAGCGAT GCAAGGGCAC AAAGTGACTG CCGTTTACAC CGCTCATGAT
GCACTCAGTG ATATTGAAAA AATAGAACCT GATGTTGTCT TACTCGATAT AGGTTTACCC
GATATGAATG GCTATGAAGT TGCCCAGCAA ATCCTTGTCA AAAAGTTGAA GCCTCTGTTG
GTTGCTCTTA CAGGATACGG TCAAGCCGAG GATGTACGTA AAGCCAAGGA AGCAGGGTTT
GATTATCACT TCACTAAACC CGTGAATTTC AGCGAGCTGA ATCACATTTT TGCGCAAAAA
TAA
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| Protein sequence | MTYTPQSKSA LNFIAGGGEM GARIRAYDWQ SSPIGQPEDW PQSLKTSVRL LLSSGHPMFI
WWGEHLIQFY NDAYASTLGP ERHPSALGQQ GRDCWAEIWP EIAPQMEQVL TGKGHTWHEN
QRLFITRNGV REEMYWTYSY SPIDDPNSAN GIGGVLVVCN ETTEQVLAEH AMKTAEARWR
SLFDQAPSFM CIVQGPEHRF EYANLNYFKL LGKQDFLGEK VIDVVPEVDA QGFIALLDKV
FESGESHHGI EMPLVVGNGA PIYIDFIYQP IMNASGHVSG ILVEGNNVTE RVMANRSLQE
QDKLKDEFLA MLAHELRNPL APIRNVSEIL LNMEQRDPKL KNIGDILARQ VRHMTHLMDD
LLDVSRISQN LINLQLEPTN FSDIVDLTIE SQQSALDTKQ HTLEVVDTPQ DLYVNGDSTR
LVQSLSNVLN NAIKYTPEGG HITLECVADI ETVQVIISDN GYGICPSMQG KVFELFAQVQ
QTLDRSQGGL GIGLNIVQRL VQMHGGSISV SSQGLGHGSC FTITLPRITA PQKMAAEAAF
ALKAEKRILI VDDNKDSADT LSELLAMQGH KVTAVYTAHD ALSDIEKIEP DVVLLDIGLP
DMNGYEVAQQ ILVKKLKPLL VALTGYGQAE DVRKAKEAGF DYHFTKPVNF SELNHIFAQK
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