Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1748 |
Symbol | |
ID | 4173677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2090904 |
End bp | 2092739 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054758 |
Product | acetyl-CoA hydrolase/transferase |
Protein accession | YP_661323 |
Protein GI | 109898068 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG CCTTACCTAA TAGGCCTGAC TGGCAAGCGT TACTTAAGTC TGGCAATCGT ATTTTTATTG GCTCGAATGC TGCCGTTCCT AACGCACTCA TTGATGATTT AATCGCCAAT AGCGGAGATT TAAAAGACAT AGAGCTGGTG CAATTTAATG CATTGTCAGA CAGTCGTTGG GTTGACCCGC ATTTCAGTGA TTTATTCAAA GTAAACGCCT TGTTTATTGG CGGCGAAAAA GTCCGTCAAG CGGTGGCTGA GGGGCGGGTC GATTACACGC CGTGTTTTTT ATCTGAAGTC CCTTCACTGT TTGAGCAGGA TATCTTGCCT TTAGATGCCG CCTTTATCAT GGTCAGCCCG CCTGACAAAT ACGGTTATTG TTCGTTAGGT GTGGCCGTTG ATGTGAATCT GGCGGCAGTT AAAAAAGCCA AGTACGTGAT TGCTCAAATC AATACATCGA TGCCACGTAC CAGCGGCCAT ACGTTTATTC GAATTGACGA CATAGCGGCA TGCATCGAAG TGGAGCAAGC GCTCCCAGAG CTGCCTATTT ACGAACCAGA TAAAATCACA GAGCGTATCG GCCAATACGT TGCCATGTTG GTTGACGATG GCGCCACGCT GCAACTAGGA GTGGGGAAAA TACCCAATGC GGTGCTGTAT TACTTGCAGA ACCACAAAGA CTTAGGCGTG CACAGTGAAT TAATTACAGA CGGTATTATC GATTTGATTG CTAAGGGCGT GATCAACAAC CGTAAAAAAA CCTTTCACCC CGGTAAAACA GTGGCGAGTT TTTGTTTAGG CAGCAAAAAG CTATATGACT TTGTTGATAA CAATCCCCAC GTGGAGTTCT ACCCCAGTGA TTATCTGAAC TCGCCGGCGA ATATTGCGCG TAATCATAAA ATGGTGGCGA TAAATAGCGC ACTGGAAGTG GACTTAACGG GCCAAGTGGT TGCCGATTCC ATTGGTTATC AGTTTTATAG TGGCATTGGC GGGCAGGTGG ATTTTATTCG TGGTGCTGCT ATGTCGCCTG GAGGTAAACC GATTATTGCC ATGCCCTCTA CTGCAAAGGG AGGCACCATT TCGCGTATAG TGCCTTTTAT CACAGAGGGA AGTGGGGTGG TGACGAGCCG CGGCCATGTG CATTATGTAG TCACCGAATT TGGTGTCGCA TCTCTTAAGG GGCGAAGTAT TCGAGAGCGA GCGCTGGAGC TAATTCGTGT AGCGCACCCT AAATTTCGTG AACAACTGTT GGCCAAAGTG CGTGAGCATT ATTGGGTGCC GAACTATCAA AAGAATTATC CTCGAGATGT GCCTGAACTC GGTCCATTAG GGTTTAAGAC GATGAAGATT GATAATCAAT CGTTTGACCT ACGGCCACTC AACCCAGCAG ACGAACGTCG TCTGCAAGAG TTCTTCTATT CCCATACCAA AGAAACCCTG TTTTACCGTT ATAACCATTA CCCCACACAA ATGACCCGTG AAAAGTCGTG TAATTTGGTC AGTGTTGATC AGAGTCACGA CTTAGCCTTG TGCATTGTTA GGCAGCAAGG TTCGGCGTCA GAAATTCAGG CCGTGGGGCG TTACTACTTG TGTGCCGACA ATAAAAGCTG TGAAGCGGCA TTTGTCACCC GAGAATCGTT TCACGGAAAG GGCATGGCTA AACAACTATT GGCAGAAATG ATCGTTATTG CAAAGCAAAG GGGGTTAACA AGAATGTTAG CGGTGGTCAG GGCGGATAAC CGCAATATGA TTAGAGTTTT TGAAAGTGCG CATTTCGAGC GCCAACCTTC ACAAGAGATG GGCGAAGTTA ATCTAACCTT GAATTTGGAC AAGTAA
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Protein sequence | MKTALPNRPD WQALLKSGNR IFIGSNAAVP NALIDDLIAN SGDLKDIELV QFNALSDSRW VDPHFSDLFK VNALFIGGEK VRQAVAEGRV DYTPCFLSEV PSLFEQDILP LDAAFIMVSP PDKYGYCSLG VAVDVNLAAV KKAKYVIAQI NTSMPRTSGH TFIRIDDIAA CIEVEQALPE LPIYEPDKIT ERIGQYVAML VDDGATLQLG VGKIPNAVLY YLQNHKDLGV HSELITDGII DLIAKGVINN RKKTFHPGKT VASFCLGSKK LYDFVDNNPH VEFYPSDYLN SPANIARNHK MVAINSALEV DLTGQVVADS IGYQFYSGIG GQVDFIRGAA MSPGGKPIIA MPSTAKGGTI SRIVPFITEG SGVVTSRGHV HYVVTEFGVA SLKGRSIRER ALELIRVAHP KFREQLLAKV REHYWVPNYQ KNYPRDVPEL GPLGFKTMKI DNQSFDLRPL NPADERRLQE FFYSHTKETL FYRYNHYPTQ MTREKSCNLV SVDQSHDLAL CIVRQQGSAS EIQAVGRYYL CADNKSCEAA FVTRESFHGK GMAKQLLAEM IVIAKQRGLT RMLAVVRADN RNMIRVFESA HFERQPSQEM GEVNLTLNLD K
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