| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1716 |
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| Symbol | |
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| ID | 4171925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2051327 |
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| End bp | 2052325 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054726 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_661291 |
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| Protein GI | 109898036 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATG TCTCAGGTTA CGAGTTAACA CCTGAAGACA GAGAGTTGCT CGATCATCCT
TTAGTGGGTG GCGTTATCCT TTTCAGTCGT AACTACTACG ATCAAAAACA ACTAAAAGAG
CTCATTGCTC AAATTCGATT GGCAGCACGC AACAAGATAT TAATTGGGGT GGATCATGAA
GGCGGCCGGG TTCAGCGTTT TCGCGACGGA TTCAGCGCTA TTCCTGCAAT GGGTGCTATT
TGCGCCCGCA GTGATGAGGG TTTGAGCCAG GCACAGCAAT ACTGCAATAC TTTTGGTTGG
CTCATGGCGG CTGAATGCCT CGCATTTGAT ATCGACTTAA GTTTTGCGCC CGTGCTCGAT
TTAAACGGCG TATCGGATGT TATTGGTGAT CGCTCTTTTC ATACCCAGCC AGAACCTCTG
ATTCAACTTG CCAGTGAGTT TATTAAAGGC ATGCACCGAG CAGGGATGAA AGCCACAGGT
AAACATTTTC CTGGGCATGG TAATGTCAAA GAAGACTCGC ATGTTGCGAT GCCGGTAGAT
AATCGAAGTC TTGAACAAAT CACTCAGCTA GATATGCAGA TTTTTAGCCG CTTAAACGAC
ATGGGCTTAC TTGATGGGGT GATGCCAGCG CATGTGGTGT ACTCTCAAGT GGATGATATG
CCAGCAGGTT TCTCTAAAGT CTGGTTACAA ACCTACTTGC GCCAAAAAAT GCAATTCGAC
GGTGTGGTAT TTTCCGATGA TTTGTCGATG CAGGGAGCCG CGTTTATTGG CGACTTTGCC
GCCAGAGCAA ATGCGGCACT AAACGCTGGC TGCGATATGG TGCTGGTATG TAATAACCCC
GACGCTGCTG CGCAGGTCAT CGATAGCTTA CCCAGTGATT TACCCACAAA TCCGCGTTTA
GCAAAGCTTG CCAAAGCGCC CTGTGCTGAC TTTAACGCAC TGGTTAAAAC AGATGCTTAC
ACAGCGGCCC AGCGCACTCT CGAAGCATAT AACAATTAG
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| Protein sequence | MLDVSGYELT PEDRELLDHP LVGGVILFSR NYYDQKQLKE LIAQIRLAAR NKILIGVDHE
GGRVQRFRDG FSAIPAMGAI CARSDEGLSQ AQQYCNTFGW LMAAECLAFD IDLSFAPVLD
LNGVSDVIGD RSFHTQPEPL IQLASEFIKG MHRAGMKATG KHFPGHGNVK EDSHVAMPVD
NRSLEQITQL DMQIFSRLND MGLLDGVMPA HVVYSQVDDM PAGFSKVWLQ TYLRQKMQFD
GVVFSDDLSM QGAAFIGDFA ARANAALNAG CDMVLVCNNP DAAAQVIDSL PSDLPTNPRL
AKLAKAPCAD FNALVKTDAY TAAQRTLEAY NN
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