Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1701 |
Symbol | |
ID | 4171910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2033843 |
End bp | 2035639 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054711 |
Product | ABC transporter related |
Protein accession | YP_661276 |
Protein GI | 109898021 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCTA AACAACACAC ACAAATTGAC GATGTCCCCT TTAATTGGCG CGTAGTAAAA CAGCTATGGC CTTATTTATT GGAATTCAAG CGCCGCGTTT TCATCGCAAT GCTCTGCCTT ATCGCAGCAA AGATCGCCAG TATCGGCCTG CCTTTTGTCT TAAAACACGC CGTTGACACT CTAAACACGC CAGATGCAGA AAACGCCTTG GTGCTTGTTC CTTTTGCGCT CATTGCCGCC TATGGGCTGC TGCGCTTAGC CAATGTCTTG TTTGGGGAGA TACGTGACAC GCTTTTTGGA CGTGTGACTG AACGCGCTAT GCGCCGTATT AGCCTACAAG TATTTGAACA TCTGCACAGA CTAGATCTCG ACTATCATTT AAATCGCCAA ACGGGGGGAT TGTCTCGCGA CATTGAGCGT GGCACCAGTG GCATAAGTTT TCTGATGCGC TTCTTAGTCT TTAATATTGT CCCTACCCTG CTGGAAATAC TGGCTGTTGT CGGTGTGCTT TTTTACAACT ATGGCTGGAG CTTCGCGGCG ATTATTTTGG TCTCAGTTAT TGGTTACATC GGCTTCTCTG TAAGAGCAAC GCACTGGAGA ACCGAGTTTG TGCGAGCGGT CAATCAAGCC GATTCGCTAA GTAATACCAG AGCGATTGAT AGCCTACTGA ATTACGAAAC AGTTAAATAT TTCAATAACG AAGATTATGA GGCTAAGCGC TACGATGTTG CCTTAGCGGA CTGGGAAACG GCACGGCGTA AAAACAGATT ATCTCTTTTT GCCCTAAATG GCGGTCAAGC CACCATTATT GCTATTGCCA TGACCAGCAT GATGGCCGTT GCTGCATATT ATGTTGCACA AGGCACCATG ACCATTGGTG ACTTTGTTTT GGTTAACGCC TTTACCATGC AAATTTTCAT GCCTCTGAAC TTCCTTGGTT TTGTATATCG CGAGATAAGA GGAGCATTAG CAAACATCGA GAATCTTTTT ACCTTACTCA GTAAATCTCC AAAAGTGATC GACAATCAAG ATGCCAAACC GTTAGTCGTC AGCAAAGGCA ATGTACGTTT TGAAAACGTA AGTTTCGGCT ACGGACCTGA CAGACAAATT TTGCACGGTG TGAGCTTTCG CGTACCTGCG GGTAAAAAAG TAGCCATTGT TGGCCCAAGC GGCGCCGGTA AATCTACTAT TATTAAATTA TTGTTTCGTT TTTATAATGC CAATAGCGGC GAAATTTATA TTGATGAGCA GCCTGTCAGC CAATTGACAC AAGCCTCGTT ACGGCAAGCC ATCGGTATAG TGCCGCAAGA CACAGTGTTA TTTAATGACA GTATTTTTGA GAATATCCGT TACGGTAACC CTTTGGCGAG TGATGAAGAG GTTTACCAAG CCATCGACCA CGCACATCTA TCTGCATTCA TCAAAGCCCT ACCCCTAGGG AAAGACACCA AAGTAGGCGA GCGGGGTCTT AAGTTATCGG GGGGCGAAAA ACAGCGCGTC GCCATTGCTC GCACTATATT AAAAGGTGCT CCGATCCTAT TGTTTGATGA AGCAACTTCG TCTCTGGACA GTCAATCTGA ACATGCGATT TTGAGTGCAT TTAGAGAGAT TGCAATCGGG CATACCAGTA TTGTTATTGC CCATAGGCTC TCGACCATAG TCGATGCTGA CAGCATCATA GTGATCCAAG ATGGCCGCGT GGTAGAACAA GGTAGTCATA CACTGCTTTT AGCCAATAAT GGTCCGTATT ACCATCTGTG GAATACACAA CAAAAAGTGA ACTCAAAAGA TGCCTGA
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Protein sequence | MRSKQHTQID DVPFNWRVVK QLWPYLLEFK RRVFIAMLCL IAAKIASIGL PFVLKHAVDT LNTPDAENAL VLVPFALIAA YGLLRLANVL FGEIRDTLFG RVTERAMRRI SLQVFEHLHR LDLDYHLNRQ TGGLSRDIER GTSGISFLMR FLVFNIVPTL LEILAVVGVL FYNYGWSFAA IILVSVIGYI GFSVRATHWR TEFVRAVNQA DSLSNTRAID SLLNYETVKY FNNEDYEAKR YDVALADWET ARRKNRLSLF ALNGGQATII AIAMTSMMAV AAYYVAQGTM TIGDFVLVNA FTMQIFMPLN FLGFVYREIR GALANIENLF TLLSKSPKVI DNQDAKPLVV SKGNVRFENV SFGYGPDRQI LHGVSFRVPA GKKVAIVGPS GAGKSTIIKL LFRFYNANSG EIYIDEQPVS QLTQASLRQA IGIVPQDTVL FNDSIFENIR YGNPLASDEE VYQAIDHAHL SAFIKALPLG KDTKVGERGL KLSGGEKQRV AIARTILKGA PILLFDEATS SLDSQSEHAI LSAFREIAIG HTSIVIAHRL STIVDADSII VIQDGRVVEQ GSHTLLLANN GPYYHLWNTQ QKVNSKDA
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