| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1664 |
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| Symbol | fadJ |
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| ID | 4172255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1982543 |
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| End bp | 1984696 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054674 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_661240 |
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| Protein GI | 109897985 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0455542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTG AAAATAGTAC CCAACAACTT GCCCCTAGCG CGTTTACCTT AACCAAGCGT
GATGATGGCA TCGCGATTTT GAGTATGGAT GTGCCAGGGG AAACCATGAA TACGCTCAAA
GTGGAGTTTG GTGAGCAAGT CGGTGACATG CTTGACCAAA TTCAAAGTGA TAGCGCTATT
AAAGGCGTGG TAGTGATCAG TGGTAAAGAT AACTCGTTTG TGGCCGGTGC TGATATCTCT
ATGCTCGCAG GATGTAAAAG TGCAGAAGAA GCTGAAGCGA TTGGAAAAGG CGGACAAGCG
GTATTCCAAC GTATCGAGGA TATGGCAGTG CCATTTGTCG CTGCGATCCA CGGCCCTGCT
TTGGGAGGCG GGCTTGAACT GGCGTTGGCG TGTCACATGC GAGTATGTAG TGACGACAAT
AAGACGCAGC TGGGCTTACC TGAAGTACAG CTTGGTCTTT TACCCGGTAG TGGTGGCACG
CAAAGACTCC CGCGGTTAAT TAGCGTTCAA CAAGCAATGA AAATGATGCT CACAGGGGCC
TCAGTACGAG CAAAACAAGC CAAAAAATAC GGTATCGTTG ACGATATGGT GCCGCGTTCT
ATTTTGCTTG AAGTCGCGAT TGAAATGGCG AAAAAACCTA AGCCGAATAG AAAACCAGTA
AAGCTTGATG CAATGGGGCA GTTTCTTGAA CGTACCCCTA TGGGCCGAAA ACTCATGTTT
AAACAAGCTC GCAAACAAAC TCAGGCTAAA ACAATGGGGA ATTATCCCTC ACCTGAGCGC
ATTATTGATT GTATCGAAAC GGGATTAGAG AAGGGAAAAG CCCAAGGTTT TGCTGTGGAA
GCTAAGCATT TTGGTCATCT GGTTATGACG TCTGAATCAG CTGCTTTACG TAGTTTGTTT
TTCGCGACCA CCGAAATGAA AAAAGAAAAT GGCGTGGAAG GAGTAGCGCC TAAAACACTG
AAGAAAATCG GCGTGTTAGG CGGTGGGTTG ATGGGCGGTG GCATTGCGTT TGTGACGGCA
ACCAAAGCTA AACTTCCGGC TCGAATCAAA GATATCCGCA GCGATGGCAT CGCGCATGCG
ATGAAATATT CCTACGATAT TTTGAACAAA AAAGTGAAGC GCAAGTTTAT GCTGCACTCA
GAAATGCAAT CTCAGTTATC ACGGCTAACA GGCTCTGTTG ATTATGTTGG GTTTGATAAC
ACCGATGTGG TGATTGAAGC GGTTTTCGAA GATTTAGCGT TGAAACAAAA TATGGTTGCG
GATGTGGAAG AGCATTGCTC AGAGCATACG ATTTTTGCTT CGAATACATC TTCTATCCCC
ATAGGTCAAA TTGCCGCTAA GGCGAAGCGC CCTGAAAATG TTATTGGTTT ACATTATTTT
TCACCGGTAG ATAAGATGCC CTTGGCAGAA GTTATTGCGC ATGAAGCCAC CTCTGACCAA
ACAATATCCA CTACGGTTGA GCTAGCGAAG AAGCAAGGTA AAACCCCGAT CGTTGTAAAA
GACGGCGCAG GTTTTTATGT TAATCGAATT TTAGCGCCAT ATATGAATGA ATCTGCTGAA
ATTCTATTGG CTGGTGAGCC CATTGAGCAG ATAGATAAGG CGTTAGTCAA ATTCGGTTTC
CCTGTGGGAC CCATCAAACT TTTAGATGAA GTGGGTATTG ATGTTGGCAC TAAAATAGGA
CCAATTTTGG TTGCTGAGTT CGGTGAGCGA TTCCAGTCAG CGCCAGGTTT TGACAAATTA
TTGGCGGACG ATCGAAAAGG TAAGAAGAAC AAGCGTGGTT TTTATAACTA TGAAGGTAAA
AAGCCTGGCA AAGAAGTCGA TGAAAGCGTT TATGATCTAC TTGGCATTAC GCCTAATAGC
CGCTTGAGCG AGCATACTAT TGCCGAACGT TGTGTGTTAC TCATGCTTAA TGAGGCCGCT
ATATGTCTTG ACGAAGGTGT TGTGCGTAAT CCTAGAGACG GTGACATAGG TGCGATATTT
GGTATCGGCT TTCCACCATT CTTAGGCGGC CCGTTTAGAT ACATGGATAC CTTAGGCATT
AACCACGTTG TGGAACGATT AACGCATTAT CAGCAGCAGT TCGGTGACAA GTTTGCGCCT
GCTAAGCGCC TTTTAGACAT GGCAGAAAGT AAGGATACGT TTTACCCGAA ATAG
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| Protein sequence | MTTENSTQQL APSAFTLTKR DDGIAILSMD VPGETMNTLK VEFGEQVGDM LDQIQSDSAI
KGVVVISGKD NSFVAGADIS MLAGCKSAEE AEAIGKGGQA VFQRIEDMAV PFVAAIHGPA
LGGGLELALA CHMRVCSDDN KTQLGLPEVQ LGLLPGSGGT QRLPRLISVQ QAMKMMLTGA
SVRAKQAKKY GIVDDMVPRS ILLEVAIEMA KKPKPNRKPV KLDAMGQFLE RTPMGRKLMF
KQARKQTQAK TMGNYPSPER IIDCIETGLE KGKAQGFAVE AKHFGHLVMT SESAALRSLF
FATTEMKKEN GVEGVAPKTL KKIGVLGGGL MGGGIAFVTA TKAKLPARIK DIRSDGIAHA
MKYSYDILNK KVKRKFMLHS EMQSQLSRLT GSVDYVGFDN TDVVIEAVFE DLALKQNMVA
DVEEHCSEHT IFASNTSSIP IGQIAAKAKR PENVIGLHYF SPVDKMPLAE VIAHEATSDQ
TISTTVELAK KQGKTPIVVK DGAGFYVNRI LAPYMNESAE ILLAGEPIEQ IDKALVKFGF
PVGPIKLLDE VGIDVGTKIG PILVAEFGER FQSAPGFDKL LADDRKGKKN KRGFYNYEGK
KPGKEVDESV YDLLGITPNS RLSEHTIAER CVLLMLNEAA ICLDEGVVRN PRDGDIGAIF
GIGFPPFLGG PFRYMDTLGI NHVVERLTHY QQQFGDKFAP AKRLLDMAES KDTFYPK
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