| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1638 |
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| Symbol | |
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| ID | 4174067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1952316 |
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| End bp | 1952699 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054648 |
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| Product | methionine-R-sulfoxide reductase |
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| Protein accession | YP_661214 |
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| Protein GI | 109897959 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT CTGAGCAAGA ATGGCGTGAA AAACTCAGTG ATGAAGAATT TAGGGTGACG
CGCCAAAAAG GCACTGAACG CCCTTTCACT GGAGAGCTGT TAGATAACAA CGCGCTCGGA
GATTATGTAT GTCGTTGCTG CGGTGAGAAG TTGTTTGACG CCCAAGACAA ATTTGATGCG
GGCTGTGGTT GGCCGTCGTT TTCGGCGCAA AGTGCTGATG GAAACGTCGA GTTTCAACAA
GACAACAGCC ATGGCATGCA GCGTATCGAG ATCGTGTGTA AAAACTGTGA TGCGCATTTA
GGTCATGTGT TTAGCGATGG ACCCGCCCCA ACGGGACAAC GGTTTTGTGT CAACTCTGTG
TCTTTGGCCT TCAATAAAAC CTAG
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| Protein sequence | MKLSEQEWRE KLSDEEFRVT RQKGTERPFT GELLDNNALG DYVCRCCGEK LFDAQDKFDA
GCGWPSFSAQ SADGNVEFQQ DNSHGMQRIE IVCKNCDAHL GHVFSDGPAP TGQRFCVNSV
SLAFNKT
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