| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1633 |
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| Symbol | |
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| ID | 4174062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1943526 |
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| End bp | 1944365 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054643 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_661209 |
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| Protein GI | 109897954 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.146434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCTTT GCAACACCGC CTCTTTGCTT CCCCAAGACG ACATCGAAAT GCTTATTATT
GATAACGAGC ATGCTCATGC GACCATTTCA TTATTTGGTG CGCATATTCT CAGTTTCACT
CCCAAGCACG ATAAAGTACA ACGCCTGTGG TTGAGCAAGA ATGCATTGCT CGATGGCAAG
CATCCTATAC GTGGTGGGAT CCCTATTTGT TGGCCTTGGT TTGGCGCTCA TGCCACCAAC
GCAGAGTTAG GCTCTCATGG TTACGTGCGT AATCAGAACT GGCACATCGT TGACTGCCAG
GACACTGAAC AATGCACCAA GATCAGCCTT AGACCGACTA CAACGACTGG CCTAGGCTTT
AACGGCCAAG CACGATTAAC AATGATCGTT ACCGTGGGCG CTGAACTTCG TATTCAGTTG
GTCACCGAAA ATACCGGCAA TAGCGCATTG ACTTATACCG GCGCATTGCA CACTTATTTT
CATGTAGATG ATATTAATGA CTGTGAATTG ACTGGGCTAA CAGGTGAATA TTTAGACAAA
CTACAAGACT TTAAACGTTT TGATACCCCT ACCCCTTATC GATTTCAGCA GGAAACTGAC
AGAGTGCATT TAGCCACGCC TAAAACATTA TCGATAAGCT CAGGAGCGCA CCAGACTGGC
ATCGCGTCAA CCGGTCACGA CAGCATAGTA GTGTGGAACC CATGGGCTGA AAAGTCAGCG
AGTATGCAAG ACATGGAAGA TGATGGCTTT CAAAAAATGC TGTGCGTTGA AACTGCTGTG
ACCCAAGGCC AACAAGTACT ATCAGGCCAG TCTCACACGT TAGAACAAGT CATTCGCTAA
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| Protein sequence | MHLCNTASLL PQDDIEMLII DNEHAHATIS LFGAHILSFT PKHDKVQRLW LSKNALLDGK
HPIRGGIPIC WPWFGAHATN AELGSHGYVR NQNWHIVDCQ DTEQCTKISL RPTTTTGLGF
NGQARLTMIV TVGAELRIQL VTENTGNSAL TYTGALHTYF HVDDINDCEL TGLTGEYLDK
LQDFKRFDTP TPYRFQQETD RVHLATPKTL SISSGAHQTG IASTGHDSIV VWNPWAEKSA
SMQDMEDDGF QKMLCVETAV TQGQQVLSGQ SHTLEQVIR
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