| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1625 |
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| Symbol | |
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| ID | 4174054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1931489 |
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| End bp | 1932862 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054635 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_661201 |
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| Protein GI | 109897946 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.701794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTG TTTTTGATAT GTTCAGTGTT GGTATCGGCC CATCTAGCTC TCACACTGTG
GGACCCATGC GAGCGGCAAA AGAGTTTAGC CAGCAATTAA AAACACAAAA CTTGTTTGAT
AAAACGGACG AAGTGCGCGC TGAGCTATTC GGCAGCTTAG GACAAACGGG CAAAGGACAT
GGTACGGGTA AAGCAGTGAT CTTAGGCTTG TTGGGCCACG CACCTGAAAC CATCGATGCT
ACCGCTGTTG ATGAGATGCT AGCGGAAGTT GAAAAAAGCA GAAGGTTAAC GCTGGATCAA
TTACATCCAG TGCGCTTTGC TGCCAAAGAC GCCATCGTCT TCCATCGACG TAAAACACTC
CCCCATCACG CCAATGGCAT GACCATTCAC GCCTTACATA AAGGCGAAAT CATTTCATCG
CAATCTTATT ATTCCATCGG TGGCGGTTTT ATTATTCGTG CCGAGGACTT TTTAGCGCAA
AAAACCGCCG CCCTCACGTT GGTAGAAAAA CCCGTCCCTT TTGCTTTTTC TAGCGCAGAA
GAGTTAGTGC GCTTGTGTAA GGAAAACGGT TTTTCTATTA GCTCGTTAAT GTACCGAAAC
GAGCAAGTAT TTCAGCCCAA AAGCGATATT ACTGCCAAGC TTTGGCACAT ATGGCAGGTT
ATGCACGCAT GTATTCAAAC CGGTATTAAA ACCGAAGGCA TTTTACCCGG CGGATTAAAA
GTGACCCGCA GAGCTCCAGG GCTACATCGC CGCCTACAAA GTGAAAAAAA CGCCGACCCC
ATGGTCGCTA TGGATTGGGT GAATTTGTTT GCTTTGGCGG TCAATGAAGA AAATGCCGCT
GGCGGGCGCG TAGTGACCGC CCCTACTAAC GGCGCAGCCG GTATTTTGCC TGCGGTACTG
TGTTATTTTG ATAAATTCGT ACGCCCAGTA GATGAAGATA TTGTGAGTCG TTATTTACTC
ACCGCTGCTG CTATCGGCAT TTTATATAAG AAAAATGCCT CAATCTCTGG GGCTGAAGTG
GGCTGCCAAG GCGAAGTTGG CGTTGCTTGC TCAATGGCTG CAGGGGCATT AACTGAAATT
ATCGGTGGCT CAGTGGATGC GGTCGAAAAC GCAGCAGAAA TAGGCATGGA ACATAATCTT
GGCTTAACTT GTGACCCTGT AGGTGGCTTA GTGCAAGTTC CTTGTATAGA GCGCAATGCG
ATGGGTGCGA TAAAAGCGAT TAATGCATCA CGCCTTGCTC TGCGTGGTAG CGGCCAGCAT
AAAGTCTCCC TCGACAAAGT CATTAAAACC ATGTGGGACA CGGGTAATGA CATGAAATCA
AAGTATAAGG AAACCGCCCG GGGCGGGTTA GCCGTTAACA TCATCGAATG TTGA
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| Protein sequence | MISVFDMFSV GIGPSSSHTV GPMRAAKEFS QQLKTQNLFD KTDEVRAELF GSLGQTGKGH
GTGKAVILGL LGHAPETIDA TAVDEMLAEV EKSRRLTLDQ LHPVRFAAKD AIVFHRRKTL
PHHANGMTIH ALHKGEIISS QSYYSIGGGF IIRAEDFLAQ KTAALTLVEK PVPFAFSSAE
ELVRLCKENG FSISSLMYRN EQVFQPKSDI TAKLWHIWQV MHACIQTGIK TEGILPGGLK
VTRRAPGLHR RLQSEKNADP MVAMDWVNLF ALAVNEENAA GGRVVTAPTN GAAGILPAVL
CYFDKFVRPV DEDIVSRYLL TAAAIGILYK KNASISGAEV GCQGEVGVAC SMAAGALTEI
IGGSVDAVEN AAEIGMEHNL GLTCDPVGGL VQVPCIERNA MGAIKAINAS RLALRGSGQH
KVSLDKVIKT MWDTGNDMKS KYKETARGGL AVNIIEC
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