| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1594 |
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| Symbol | |
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| ID | 4173848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1898961 |
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| End bp | 1900607 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054604 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_661170 |
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| Protein GI | 109897915 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATAC TTATCGTCGA TGATGACTCC CTTAATCGAT TTTTACTTTT GCATATGCTC
GAACAAAAGG GTTATGTAGA TTGTTACGAG GCTGAAAGTG GCCACGAGGC AGTGTCATTG
GCTAAGCGGA TCAACCCAGA ATTGGTCTTA CTCGATGTCA TGATGGACGA CATGAATGGG
TATGAAGTCG CACCGATACT CAAAGAGCAA GCCGGTGATA TCTATTTACC CATTATCTTC
ATCACGGCAC TGGATGATGA AGAAAGCTTA GTGCGCTGCT TAGAGGTAGG CGGTGATGAC
TTCGTCGCCA AGCCATTTAA TAAAACCATT TTAGCGGCCA AAATCAGTGC CCATGCACGC
ACACGCGAAT TAAGCAAAAA GTCCTACGAG CAAAATCAAC AACTGGTTTT TTACCGCAGT
GCGGTGGAGC GAGAGCACAA AATTGTTGAG CACATCTTTT CGAATGCAGT GACTAACGAC
AAAAAATTGT TGCCGTATAT AGATTTTACG CTCATGCCAG CGACAGATTT TAATGGCGAT
TTATTGTTGT TTAGCGCGAG CCCTAATGGC GGGCTGTATT ACTTGATCGG GGATTTTACT
GGTCATGGCT TGGCCGCGGC GATCGGTGCG TTGCCCGTCT CTCAAGCCTT TCATACTATG
GCGAGTAAAG GATTGTCAGT GTTTGAAATG GCTCAAACCT TAAACGAAAC CTTACTCAAA
CTATTACCTG GAGATATGTT TTTTGCCGCA GCAATTGTGC ATATTAGCAG CACTGGTACG
CGCTTTGAGA TATGGAACAG TGGGATGCCG GATCTTCTAC TTTTTGATTT GAATGGGCAA
GTCATTAAGC GCTTTGGGTC TCAGCACATG GCTTTGGGCA TATTAGAACC CCACGAAATG
GGTAAGGATG TTCAGCGGCA TCAAAGCTCA GTGGGTGAAC GTTTACTGGC GTTTTCAGAT
GGTGTAATTG AGATCACGGA CGACGAGAAA AATATGCTAG GTGAAGCGCC TATTACGGAC
TGGATTGCCC AAAAAGCGGA TATGTCAGTT TTTGAATTAT TTGAACACAT TACACATTTT
AGCCAAGATA CAGACCCCCT AGACGATCTC ACCTGCGTAT CTTATACCTG TCAGTCTCTG
TCTGCGCTCG CACGGCGTCA GCAGGTTACA CATGTACCCT TTAAATTAAA CCTTACTCTT
GATGCTGAAA CGATAATTGA AACTGATCCC GTGAAAAGTG TAATCAATAT GGTTTGTAGC
CAAATAGGTA TGTATGGTTT ACATGCTCGC TTATTTACCC TGGTAAGTGA ATTATACAAT
AACGCACTGG ACCACGGAGT ATTGCAGTTA GATTCAAATC TAAAGCACTC CCCCGAAGGT
TTTGAAGCAT ATTTTGACTT GCGTATGCAG AGGTTGGCGC AATTGAACCA GGCGCAGATT
ACGATTACGT TAACGTACGA GCCTGCACAG AGACGCTTGA TTATCGTGGT ACGCGACTCC
GGTTCTGGTT TTGATTACCA GCAATATTCT AAGCAAGTGG ATGTAGAGAA TTGCTTTGGG
CGAGGCATCC AGCTAGTCAA TGAGTTGTCG GATTCAGTAC GATATTTTGA ATCTGGCAAT
GCAGTTGAAG TGACAATTAA CGTATGA
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| Protein sequence | MRILIVDDDS LNRFLLLHML EQKGYVDCYE AESGHEAVSL AKRINPELVL LDVMMDDMNG
YEVAPILKEQ AGDIYLPIIF ITALDDEESL VRCLEVGGDD FVAKPFNKTI LAAKISAHAR
TRELSKKSYE QNQQLVFYRS AVEREHKIVE HIFSNAVTND KKLLPYIDFT LMPATDFNGD
LLLFSASPNG GLYYLIGDFT GHGLAAAIGA LPVSQAFHTM ASKGLSVFEM AQTLNETLLK
LLPGDMFFAA AIVHISSTGT RFEIWNSGMP DLLLFDLNGQ VIKRFGSQHM ALGILEPHEM
GKDVQRHQSS VGERLLAFSD GVIEITDDEK NMLGEAPITD WIAQKADMSV FELFEHITHF
SQDTDPLDDL TCVSYTCQSL SALARRQQVT HVPFKLNLTL DAETIIETDP VKSVINMVCS
QIGMYGLHAR LFTLVSELYN NALDHGVLQL DSNLKHSPEG FEAYFDLRMQ RLAQLNQAQI
TITLTYEPAQ RRLIIVVRDS GSGFDYQQYS KQVDVENCFG RGIQLVNELS DSVRYFESGN
AVEVTINV
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