| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1593 |
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| Symbol | |
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| ID | 4173847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1898622 |
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| End bp | 1898927 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054603 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_661169 |
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| Protein GI | 109897914 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTGG AGCGCAGATT TTCAGCTGAT AAAAAACAAT TAACAGTCGT AGCTGATGAA
GTGTTTGATT TTGGAAAAGT GCAAGACTTT CGTGTGGCCT TTTCCACCGA TATTGAAGAT
GTTGAAGCGG TGATCATCGA TTTGCATAAA ACCGCTTACA TGGATAGCTC AGCGCTGGGC
ATGTTGCTTA ATATGCAAAA GTTGCTATCT GGTAAGGTGA CGAGCTTCAA GATTATTAAT
ACCCGTCCTC AAGTGCTTAA AATTTTACAA ATTGCACGCT TCGATAAAAA ATTCGAGATC
ACTTAG
|
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| Protein sequence | MSLERRFSAD KKQLTVVADE VFDFGKVQDF RVAFSTDIED VEAVIIDLHK TAYMDSSALG
MLLNMQKLLS GKVTSFKIIN TRPQVLKILQ IARFDKKFEI T
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