| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1582 |
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| Symbol | |
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| ID | 4173836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1887195 |
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| End bp | 1887650 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054592 |
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| Product | MerR family transcriptional regulator |
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| Protein accession | YP_661158 |
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| Protein GI | 109897903 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAGG AACCACTGGT CAGTATCGGC TTTATCGCAA AGCGCACTGG TAACGCGGTC
TCTTTAATCC GCTACTATGC CAACCAAGCA CTTATTCCAT CTGTTCGCAC TCCAGGCGGC
AGCCGCGTCT TTCCTCGTTC AGTCATACGC CGGGTGTCCT TTATTCTCAT TGCACAAAAT
ATGGGATACA GCTTGGATGA AATACGCCAA CTACTAAAAG CATTGCCTGA TAACCGAACA
CCGACAAAAG ACGATTGGAC CGCCCTAAGT GAGATCTTTA ATCAGCGTAT TGAGCAGCGT
ATTGCTGAAC TTACCCAACT TAAATCGTCA TTAGCAGGGT GTATCGGTTG TGGCTGCCTG
TCTTTAGACA AATGTCGTCT GTACAATAAA GAAGATAACA TTGCGACAAA AGGCGCAGGG
GCGAGATTTT TATTAGGCGA TAGGCCGAAT TTATAA
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| Protein sequence | MPKEPLVSIG FIAKRTGNAV SLIRYYANQA LIPSVRTPGG SRVFPRSVIR RVSFILIAQN
MGYSLDEIRQ LLKALPDNRT PTKDDWTALS EIFNQRIEQR IAELTQLKSS LAGCIGCGCL
SLDKCRLYNK EDNIATKGAG ARFLLGDRPN L
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