| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1566 |
|---|
| Symbol | leuS |
|---|
| ID | 4172558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1869801 |
|---|
| End bp | 1872413 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638054575 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_661142 |
|---|
| Protein GI | 109897887 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.408978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA AAATTTACGA ACCTCAGAAA ATCGAACAAG AGGTACAAGC GCTTTGGGAA
ACCAATCAAA CTTTTAAAGC AACTGAACAA GAAGATAAAG AGAAATTCTA CTGCTTGTCC
ATGTTCCCTT ATCCAAGTGG GCGCTTGCAC ATGGGTCATG TGCGTAATTA CACCATAGGT
GATGTCGTTA GCCGTTTTCA ACGTATGAAT GGCAAGAACG TTTTACAACC AATGGGTTGG
GATGCATTCG GCTTACCGGC TGAAAACGCC GCATTAAACA ACAATACCGC TCCAGCTAAG
TGGACATATC AAAACATCGA TTACATGAAA AACCAGTTAA AATCGCTTGG TTTTGGTTAT
GACTGGGATC GTGAAGTTGC CACCTGTAAA AAAGACTATT ACCGCTGGGA ACAATGGTTC
TTTACTCGCC TGTATGAGAA AGGGTTGGTC TACAAGAAGA ACTCTACCGT TAACTGGGAT
CCGGTTGATC ACACAGTATT AGCCAACGAG CAAGTTATTG ATGGTCGAGG TTGGCGCTCT
GGTGCGTTGG TGGAGCAAAA GGAGATCCCT CAGTGGTTCA TCAAAATCAC CGATTACGCA
GAAGAGTTAT TGACAGACTT GGAGCAGTTA GAGGACTGGC CTGAACAAGT ACGTGCCATG
CAGAAGAACT GGATTGGCCG TTCAGAAGGT GTAGATATCA CCTTTAATCT TAGTGAGAAC
GCTGCTGACA TTAGTAGTTT CGACGTGTAT ACCACGCGAC CTGACACACT TTACGGTGTA
ACTTACGTCG CCGTTGCTGC ACAGCATCCT CTTGCCTTGC ATGCCGCACA AACTCGACCA
GAACTAGCCG AGTTTATTGA ATCTTGTAAA AATACCAAAG TGGCCGAAGC TGAGCTTGCC
ACTATGGAGA AAAAAGGCTG TGACACAGGC TTGTTCGCTA TTCACCCGTT AACCGGTGAA
AAAGTGGCGG TGTGGGTCGC TAACTTCGTG CTGATGGGCT ATGGCTCGGG TGCGGTTATG
TCTGTACCTG GTCATGACCA GCGTGATTGG GAGTTTGCCC AGAAATACGG CCTACCTATT
AAGCAAGTGG TTGAGCCCAG TGCAGATGAG CCACAAGAAT GTGACTTAAC CACAGCGGCA
TACACTGACA AAGGCGTGCT TGTGAACTCA GCTGAATTTA ATGGCTTAGC GTTTCAAGAA
GCGTTTGATG CCATTGCAGC TAAACTTGAA GCACTTGGTG CAGGTAGCAA AAAAGTCAAT
TACCGTTTGC GTGACTGGGG CGTATCTCGT CAACGTTATT GGGGTTCACC TATCCCGATG
CTGAATCTTG AAAACGGAGA GTCTGTTCCT GTTCCGAGCG ATCAGCTGCC CGTTGAATTA
CCTGAAGACG TGCAAATGAA CGGTGTTATC TCGCCAATAA AAGCCGATCC TGACTGGGCA
AAAACGGAAT ATAACGGTCA ACCTGCGCTA CGTGAAACCG ATACATTCGA TACCTTCATG
GAATCTTCTT GGTATTACGC TCGCTACTGC AGTGCCCAAA ATCAAGATGC CATGCTCGAC
CCAACTCAAG CCAACTACTG GTTACCGGTA GATCAATATG TGGGCGGTAT TGAGCACGCT
ATTTTGCATC TATTGTATTC ACGCTTCTTC CACAAGCTGC TTCGTGACGA AGGACTCGTG
AACTCTGACG AGCCTTATAA GCGTTTATTG TGCCAAGGTA TGGTACTCGC TGATTCCTTC
TTCAGAGAAG ATGAGAGCGG TAAGAAAGAG TGGTTCTCTC CTGCAGATGT TGACACTGTG
AAAGACGAAA AAGGCCGTAT TACGCAAGCG ACTTTAAAAG CGGATGGTAA GCCGGTTGAG
CACGGTGGCA TGACCAAGAT GTCTAAGTCG AAAAACAACG GTATCGACCC CCAGCATGTT
ATTGATTTAT ACGGCGCAGA TACAATCCGT GTGTTCACTA TGTTTGCCGC GCCACCTGAG
CAAACCTTGG AGTGGGTAGA CTCCGGCGTT GAAGGGGCTA ATCGCTTTAT CAAGCGCGTG
TGGAAGCTGA CTCAAGACCA TATCGACGCC CTTGATGGCG ACACTGCACC GGCTATTGAC
AAGACAGCTC TAACGGGCGA TCAAAAAACC TTGCGCCGCG CCGTTCATCG CACCATTGCA
AAAGTCACAG ATGATGTCGG TCGTCGCCAA ACCTTTAATA CTGCTGTTGC GGCAATCATG
GAATTGCTCA ATAGCTTGCA AAGAGCGCCC CAGAGTACAG ATCAAGACAA AGCGGTGCTG
CGCGAAGCCA TTGAATCAGT GGTTTTATTA CTTAACCCTA TTGCCCCCCA TATGTGTCAC
ATTTTATGGC ACGACCTAGG CCACAAAAAT GATATTGAAA CTGCGCCTTG GCCGGCAGTA
GATGAATCAG CATTAGTAGA AGATGAAAAG CTGATCATCG TGCAAGTCAA CGGTAAAGTG
CGCTCTAAAA TTACTGTGGC AGCAGATGCC AGCCAAGAAG AAGTACAAGC CCTTGGTTTA
GCTCAAGAAA ATGTGCAGCA GTTTGTAGAC GGCAAGACCA TACGCAAGGT GATTTATATT
GCTGGTAAAT TGCTCAACAT TGTCGCCAAC TAA
|
|---|
| Protein sequence | MAEKIYEPQK IEQEVQALWE TNQTFKATEQ EDKEKFYCLS MFPYPSGRLH MGHVRNYTIG
DVVSRFQRMN GKNVLQPMGW DAFGLPAENA ALNNNTAPAK WTYQNIDYMK NQLKSLGFGY
DWDREVATCK KDYYRWEQWF FTRLYEKGLV YKKNSTVNWD PVDHTVLANE QVIDGRGWRS
GALVEQKEIP QWFIKITDYA EELLTDLEQL EDWPEQVRAM QKNWIGRSEG VDITFNLSEN
AADISSFDVY TTRPDTLYGV TYVAVAAQHP LALHAAQTRP ELAEFIESCK NTKVAEAELA
TMEKKGCDTG LFAIHPLTGE KVAVWVANFV LMGYGSGAVM SVPGHDQRDW EFAQKYGLPI
KQVVEPSADE PQECDLTTAA YTDKGVLVNS AEFNGLAFQE AFDAIAAKLE ALGAGSKKVN
YRLRDWGVSR QRYWGSPIPM LNLENGESVP VPSDQLPVEL PEDVQMNGVI SPIKADPDWA
KTEYNGQPAL RETDTFDTFM ESSWYYARYC SAQNQDAMLD PTQANYWLPV DQYVGGIEHA
ILHLLYSRFF HKLLRDEGLV NSDEPYKRLL CQGMVLADSF FREDESGKKE WFSPADVDTV
KDEKGRITQA TLKADGKPVE HGGMTKMSKS KNNGIDPQHV IDLYGADTIR VFTMFAAPPE
QTLEWVDSGV EGANRFIKRV WKLTQDHIDA LDGDTAPAID KTALTGDQKT LRRAVHRTIA
KVTDDVGRRQ TFNTAVAAIM ELLNSLQRAP QSTDQDKAVL REAIESVVLL LNPIAPHMCH
ILWHDLGHKN DIETAPWPAV DESALVEDEK LIIVQVNGKV RSKITVAADA SQEEVQALGL
AQENVQQFVD GKTIRKVIYI AGKLLNIVAN
|
|---|
| |