| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1556 |
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| Symbol | |
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| ID | 4172548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1860166 |
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| End bp | 1861338 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054565 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_661132 |
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| Protein GI | 109897877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000411201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACA CCAAGACATT CATATTAGCC ATCTTTAGCT GCTTCTCCCT TTCCTTTTTC
TCTCATGCGG CGAGTGCAGC GGTCATCATA CCTGACGCGC CTTCCGTATC GGCTAAAGGC
TTTATTTTAG TCGACTTTCA AACCGGCAAG GTGATTGCTG AGCAAAATTC TGATATTCAG
ATACCGCCAG CAAGCTTGAC TAAAATGATG ACAAGCTACG TGATCGGCAA AGAGATCGCC
AATGGCAATA TTAAAGACAC TGACATGGTC ACGATTTCAG AAAATGCTTG GGCCAAGAAC
TTTCCTGATT CATCTAAGAT GTTTATCGAA GTGGGTACAC AAATTTCGGT GGGCGACTTA
AATCGCGGCA TCATTGTACA GTCGGGAAAT GATGCATGCG TGGCGATGGC AGAGCACATT
GCCGGTAGTG AAGATGCGTT TGCCAGCATG ATGAATTTGC ACGCTGAAAA GTTAGGCATG
ACGTCAACGC ACTTTGTAAA CAGCCATGGC TTACAAGATG CCGACCATTA CACGACCCCT
CGGGATATGG CGACCTTAGC CCGCGCATTG ATCACAGATG TGCCAAATGA GTATAAGGTT
TATAGCGAAA AAGAGTTTAC CTACAACAAC ATCAAGCAAT ATAACCGTAA CGGTTTATTG
TGGGATAAAA GCCTGAATGT GGATGGCATA AAGACGGGCC ACACCTCAGA TGCAGGTTAT
AGCTTGGTGT CCTCAGCGAC CCAAGGCGAT ATGCGTTTAA TCGCGGTGGT CATGGGCGCT
GATAGCGAGC GTGCACGTAA AGTTGAAAAC AAAAAGCTCC TTAAGTATGG GTTTAGATTC
TATGAAACTA TCACCCCGTA TCAGGCAGGC GAAAGCTTTG TATCACACCG CATATTTATG
GGCGACAAAG AGACTGTAGA TCTTGGTATT TCACAAGACA CCCCCATTAC TATTCCTCGC
GGTCAGAGCA AAAATTTAGA AGCCAACTTC GAGCTAGATA AGAAGTTAGA AGCACCTTTG
GCTAAAGGTG AAGTAGTTGG AAAGTTATTC TTGCAATTAG ACGGTGAAGA CGTAGCCGAA
TATCCTTTGG TTACATTACA AGAAGTAAAA GAAGGCGGTA TGATTGACCG CCTTGTAGAC
TTCGTTAAAC TGCAACTTGG CTTTGATAGC TAA
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| Protein sequence | MRNTKTFILA IFSCFSLSFF SHAASAAVII PDAPSVSAKG FILVDFQTGK VIAEQNSDIQ
IPPASLTKMM TSYVIGKEIA NGNIKDTDMV TISENAWAKN FPDSSKMFIE VGTQISVGDL
NRGIIVQSGN DACVAMAEHI AGSEDAFASM MNLHAEKLGM TSTHFVNSHG LQDADHYTTP
RDMATLARAL ITDVPNEYKV YSEKEFTYNN IKQYNRNGLL WDKSLNVDGI KTGHTSDAGY
SLVSSATQGD MRLIAVVMGA DSERARKVEN KKLLKYGFRF YETITPYQAG ESFVSHRIFM
GDKETVDLGI SQDTPITIPR GQSKNLEANF ELDKKLEAPL AKGEVVGKLF LQLDGEDVAE
YPLVTLQEVK EGGMIDRLVD FVKLQLGFDS
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