| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1552 |
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| Symbol | |
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| ID | 4172544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1856918 |
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| End bp | 1857649 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054561 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_661128 |
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| Protein GI | 109897873 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0710319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCTGG CACCGTTCAT GTCCCCTATC AATGTTGCGC AGTTTAAGGG GCTCATCAAA
GACGGCTTTT ACGATGGTTT AGACTTCTAT CGCGTGATTG ACGGCTTTGT AGCTCAAGGG
GGAGATGTTA CAGAAAGTAG GCCTCATGAA CACACTAAAC AGCTGCCAGC GGAACTAACT
CGTAGTTATA ATGGCTTAGG CAACGCTGAC GATGACCCGT TCGTGTTGGT GCAAACTGGC
GAGTTTATGG CTCCGCAAAC AGGTTTCTTA AACGGTTTTG CTGCAGGTCG CGACCCATCA
ATTCACCAAG AGTGGTTATT GCACTGCCCG GGTGTGGTTG CATTTGGCCG TAACAATGGA
CTTAACACCG CGAGTTCCGA GTTTTATATC GCCATCGGAC AAGCCCCAAG GCATCTTGAT
AGGAACATGA GTGTGCTGGG AAAAGTGATT TACGGTATGC ACCATGTACA ACGTATTAAA
CGCGCCTCAA TGAATGTCCC CAGCGGGGTA ATTGAAGACC CAACAAAGCG CACCAAAATA
GTCTGGGCTA GGCTTGCCAA TGATATTCCG GCGCAGCAGC GTGTTGACGT TCAGGTGCAA
GATGAACACT CTGACGCCGT TACCACTCGC ATAGCGCTCG GACGCACATT GGAGAATGAA
TTTTTTCATT ACAAAGGTAA TGGCAATGTA GATGTGTGTT ATTACAACTT GAAAACTCGA
ATAGTAGAAT AA
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| Protein sequence | MELAPFMSPI NVAQFKGLIK DGFYDGLDFY RVIDGFVAQG GDVTESRPHE HTKQLPAELT
RSYNGLGNAD DDPFVLVQTG EFMAPQTGFL NGFAAGRDPS IHQEWLLHCP GVVAFGRNNG
LNTASSEFYI AIGQAPRHLD RNMSVLGKVI YGMHHVQRIK RASMNVPSGV IEDPTKRTKI
VWARLANDIP AQQRVDVQVQ DEHSDAVTTR IALGRTLENE FFHYKGNGNV DVCYYNLKTR
IVE
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