| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1534 |
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| Symbol | |
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| ID | 4172983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1839578 |
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| End bp | 1840897 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054543 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_661110 |
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| Protein GI | 109897855 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGT TATCAGAAAA CGAAACGACC ACGTTTACGG TTTTATGTGT CGATGATGAA
GTCAATATTC TCAAAGCCAT CAAACGAGTT CTTCACAGGC AAGATTTTAA ACTGATCACA
GCTGAAAGTG GTGCACAAGC ATTAGAGATT CTAAAGCAAG AATCCGTTCA GGTCATCGTT
TCAGACATGA GAATGCCAAA TATGTCAGGC GCTGAGTTTT TGCAGAAAAG TACTGAAATT
ATCCCCGACT GCTATCGCAT CCTGCTGACT GGTTATTCTG ATATGTCATC AACCATTGAT
GCCGTAAACA AGGGAGACAT CGACCGTTAC TTACAAAAGC CATGGGATAA CCACGAGCTC
ATCACCACGG TTAACGATGG TCTGGCGAAA ATTAAACTTA AGCTTGAGAA TAAGCGTCTG
AGTAACTTAG TTAATAAGCA AAATGCCTTG TTGAAGGATT TGAATCACAA CTTAGATGAA
AAAGTAAAAC TGCGCAGCAA ACAAATAGTA CTCGCGATGC GCAAGCTAGA GCACAATACC
CTTGCCACCC AGCGCGTACT GTATAATTTC ATTAGTATTA ATCCCCACCT TGATGGCGGG
TTTGCGCAAA GTGTGAGCCA TCTAGCAGGT AAAATTGCCG ACCAAATGTC TTTGCCTGAA
AAAGAACACA ACCATGTTAC TTTTGCATCG CTGCTTTGTG AAATCGGCCT ATTAGGGTTA
GACACCGCCC TGTATGCTAA ACCTTTCAGT GAGCTTAACT ACAATCAGCA AGATATTTTT
ATGCATCAAA CTAAATTTGC TGAACAAATT TTAAGTCCTG CAACTCATCT TCGCGACGAA
CTGGATATAA TTACGTGTCA GTTTGAATAC GTAGACGGCA CAGGCCCTAA CAAGCTTTTC
CTTGAGCAAA TACCATTAGG TGCACAAATT CTAGCGGTCG CGAGGGATTT CTGGCGCTAT
AAATTAGGGC GTATAGGCAA AACCCCTCTA TCCAATAGTG AAGCGATTAA TGAGCTGAAG
AAATACCGAG GATTACGATA CGCGGCCAAA GTCCTAGACA TTTTGGTCAA AAATCCAGAT
CTTATCAGTG GCCAGTTTAT TGCCGCGGCA ATACAAGTCG TTGATCTGCG TGATGGTATG
CGTTTAAAAG AAGATATTCT GACGGAAAAT CACATATTGG TGCTGCCTAA AGGCCATGTG
TTTTCTGATG CTTCCATTCG CCAACTAGCC AACTATGAAA AACAAAAAAG CCAGTCTTTT
GCCATCCATG TGCATCCAGC AGAAACCGCG CCAGACACTA CTGAGGTAGA GGAAAACTAA
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| Protein sequence | MNTLSENETT TFTVLCVDDE VNILKAIKRV LHRQDFKLIT AESGAQALEI LKQESVQVIV
SDMRMPNMSG AEFLQKSTEI IPDCYRILLT GYSDMSSTID AVNKGDIDRY LQKPWDNHEL
ITTVNDGLAK IKLKLENKRL SNLVNKQNAL LKDLNHNLDE KVKLRSKQIV LAMRKLEHNT
LATQRVLYNF ISINPHLDGG FAQSVSHLAG KIADQMSLPE KEHNHVTFAS LLCEIGLLGL
DTALYAKPFS ELNYNQQDIF MHQTKFAEQI LSPATHLRDE LDIITCQFEY VDGTGPNKLF
LEQIPLGAQI LAVARDFWRY KLGRIGKTPL SNSEAINELK KYRGLRYAAK VLDILVKNPD
LISGQFIAAA IQVVDLRDGM RLKEDILTEN HILVLPKGHV FSDASIRQLA NYEKQKSQSF
AIHVHPAETA PDTTEVEEN
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