Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1519 |
Symbol | |
ID | 4172968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1824159 |
End bp | 1825355 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054528 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_661095 |
Protein GI | 109897840 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCATA AAGAATGGAA TGCTATCACC ATGCTTAGAT ATTTTTTCCC CTTAGTATTA CTCGCCACGT TTTCAGCATT TAGTCAGGCC AAAGACTGCC AATTTGACGA TGTCACCTTT CATAGCGACT TTAGCACTGC CCGTTTGAGT ACCTGCGAAC GGTTGGCTAA ACATGAATAC CATATTGGTA TTTTGCCAGA AAATGAGCCG GTTAATCCTA GCCCTTGGTT TGGTTTTAAA GTTCAGTCAG AACAAAATGC CCAGATAACG CTTAAACTGA CGTTCAATGG CAACAACCCC CGCTATTTAC CAAAACTCAG TACGGATGGC ACTCAGTGGC AAAACATTCC GTTTAACACT AAAGGCAAAG AAATGTGGAT CAGCCTGAAC ACAGGCAAAG AGCCAATTTG GATTTCAGCC CAAGAAGCCA TTGATAATCA AGAGTATGAC GATTGGCTAG CCAGTCTCAA AAAACAGCAA CCCTCCCTTG AGGTTGAAAC GTTAGGGCAA TCAGAAAAGG GCCGGCCAAT CAAAGCGTTG ATTAAACAGT CGCCGAAGAA TAACGAATGG CTAGTGATCA TAGGACGCCA ACACCCGCCA GAAGTGACAG GGGCCATGGC GCTATTTGCT TTCAGTGAAG CCCTATTACT GGATGAGGCA TTAAGTACCC CGTTCTTTGA ACGCTTTAAC GTTCTGATGG TGCCAGATTT GAACCCTGAC GGCGTTGAAA CCGGTAACTG GCGACACAAT GCCAATGGCA TTGACCTTAA CCGAGACTGG AAAAACTTCG CTCAAGCAGA AACGCGGCTG GTACGAGACA AAATGACCAG CATAGTGCAA GGCGGCGGTA AAATTGTATT TGCGGTAGAT TTTCACTCAA CCTTTCATGA TGTTTTTTAC ACCATGCCAG ATGATCATGA TTTAGCACCT ATCCCTTTGA TGGCCGGCTG GTTATCCGAT TTAGATGCCG AGACAGGTTG GGTTTTCAAA ACCGTGAATA AGTCAGCCTC ATCACCGGAT CGCGGAATAT TCAAGCAGTA CATCGCCGAT CACTATAAAG TACACGGGGT CACCTACGAA GTGGGTGATA ACACCAATCG CCAACTTATT CCTTATGTTG CAAAGCAAGC TGCCAAAGCC TTGGTAGAAA ACCTGTTAGA CGTTGAACCA GAAGCATTTT ATGTTGATAA AAAATAA
|
Protein sequence | MTHKEWNAIT MLRYFFPLVL LATFSAFSQA KDCQFDDVTF HSDFSTARLS TCERLAKHEY HIGILPENEP VNPSPWFGFK VQSEQNAQIT LKLTFNGNNP RYLPKLSTDG TQWQNIPFNT KGKEMWISLN TGKEPIWISA QEAIDNQEYD DWLASLKKQQ PSLEVETLGQ SEKGRPIKAL IKQSPKNNEW LVIIGRQHPP EVTGAMALFA FSEALLLDEA LSTPFFERFN VLMVPDLNPD GVETGNWRHN ANGIDLNRDW KNFAQAETRL VRDKMTSIVQ GGGKIVFAVD FHSTFHDVFY TMPDDHDLAP IPLMAGWLSD LDAETGWVFK TVNKSASSPD RGIFKQYIAD HYKVHGVTYE VGDNTNRQLI PYVAKQAAKA LVENLLDVEP EAFYVDKK
|
| |