Gene Patl_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1484 
Symbol 
ID4172210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1782924 
End bp1783529 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID638054494 
Producthypothetical protein 
Protein accessionYP_661061 
Protein GI109897806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTATTT TGAAGATAAT CACTCACCAA CTTCTTTACA CAACCTTTAC TCTTTTCCCT 
CTAACAATCC TCTGTCTTGC GTATCCAATA TATATCATCT TTGGAGGCGC TAGTATGACC 
CACTCTTTGA AGCGACATAT AAAACGATCT GTAAAACTAG CTGTGAAACG CTCAAAGCAA 
GGTATGAAGT GCCGATTCGC TTTTATTGCG TTAATTAGCT GTTTGCTTTT AACGTCTTGT 
GGCTTATTTC ACGGTCGGCA TTCAGGTGGT CATGGTAACG TTAATGTTCG AGGCGGAGGT 
AATGGGCCGG CAGCGCTAAT TATATTAGGC GTAGGAGTTG CGATTGGCAC CATCATATCC 
GCCATACCCG ACAAACATAC CCCTATCAGC TCAGGCCGCT ATTATGCTGA TGGCATATTT 
TACCGCGATA CGTCACAGGG TTACGAGGTG ATTTCTGCAC CGATGGGCGT CTGGGTAAAT 
GACATCCCTG CCCAGCACAG ACTGTCACGC TTTCAAAATA GAGATTACAT TGAATGCAGA 
GGGGTTTGGT ATCGTTATAG TGAAAATACT CAACAATATC AGGTAATTAA AAATCCTTAT 
AAATAG
 
Protein sequence
MLILKIITHQ LLYTTFTLFP LTILCLAYPI YIIFGGASMT HSLKRHIKRS VKLAVKRSKQ 
GMKCRFAFIA LISCLLLTSC GLFHGRHSGG HGNVNVRGGG NGPAALIILG VGVAIGTIIS 
AIPDKHTPIS SGRYYADGIF YRDTSQGYEV ISAPMGVWVN DIPAQHRLSR FQNRDYIECR 
GVWYRYSENT QQYQVIKNPY K