| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1447 |
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| Symbol | |
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| ID | 4173604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1740074 |
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| End bp | 1741006 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054457 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_661024 |
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| Protein GI | 109897769 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC ATGTGCTTTT TCGGGGGCCA CAATCACGTA ACGACACCTG GCAGGCACTC
TTTGCTGATG CCCTGCCTAA CGTGGCTTGG CACCACTGGC CGCATGTGGA AAATAAAGAC
GCTATTGAGT TGATGATAGT GTGGAAATTG CCGCGTGATT ACCAACAAGA CTATCCCAAT
TTGAAAGTCA TATTCTCAGT TGGGGCGGGC GTTGACCAAC TCGACTTAGC TAGCGTGCCT
GAGCATATTC AGGTGGTACG TATGCTTGAC CCAGGTATTG CCAAAGGCAT GAGCGAGTTT
ATTGCTATGC ATGTGCTGAA TATTCATCGA GATACCTTCG CCTATATCAA CGCGAATAAA
ACCGGCTCGT GGCGACCAAT GCCCACGGTG GCTAATAAGC AAAGACGCGT CGGTATTTTG
GGCTTAGGTA ACTTAGGCCA AGCTGCAGCA CAAACCGTTT TACAACTGGG GTTTAGTGTC
AATGGCTGGA GCCGCCGCCC GAAACACGTT GAGCAGGTGA CGTGTTTTAG TGGCGATGCT
GAATTAGAGT CGTTTTTAGC CCAGACGGAT ATTTTAGTGT GCTTAGTGCC GCTTACACCA
GAAACACGAG GCATACTCAA CGCGAAAACC CTAAGCCAGC TCCCCAAAGG GGCCAGCGTG
ATTAATGTAG GGCGCGGCGA ACAGTTAGTG CCAGATGATT TAATGACTTT GCTCGATGCC
CAGCATTTAT CCTACGCCGT ACTTGATGTG TTTGAGATTG AGCCCCTACC TGAAACACAT
CCACTATGGC AACACCCTCA GGTTTTAGTG ACCCCACATA TCGCTGCTAT CACTCAAGAT
GACAGCGCAG GTCAAGTGCT CGTCAGCAAT GTGCAGCGTT ACATCAATAA ACAAGCTCTC
ATTGGCCTAG TGGATAGGGA CCGCGGTTAC TGA
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| Protein sequence | MTTHVLFRGP QSRNDTWQAL FADALPNVAW HHWPHVENKD AIELMIVWKL PRDYQQDYPN
LKVIFSVGAG VDQLDLASVP EHIQVVRMLD PGIAKGMSEF IAMHVLNIHR DTFAYINANK
TGSWRPMPTV ANKQRRVGIL GLGNLGQAAA QTVLQLGFSV NGWSRRPKHV EQVTCFSGDA
ELESFLAQTD ILVCLVPLTP ETRGILNAKT LSQLPKGASV INVGRGEQLV PDDLMTLLDA
QHLSYAVLDV FEIEPLPETH PLWQHPQVLV TPHIAAITQD DSAGQVLVSN VQRYINKQAL
IGLVDRDRGY
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