Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1446 |
Symbol | |
ID | 4173603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1738740 |
End bp | 1739666 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054456 |
Product | hypothetical protein |
Protein accession | YP_661023 |
Protein GI | 109897768 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTTC GCGATACCCC TCACTCGTTT CGGTTGTTTT TTATTTTGCG TGGGTCGGTT TTACCGCTTA TTTACGGGAA AATTCTATTT ATCACCTTGC TGGGTGTGGC AGTTGCTGTA GCGCAACATT TCTATCCTAA AATATTCCCA GATTTTACCC TTGCGCCTGT GGCTTTGTTT GGTGTGGCGT TGTCGTTGTT TCTTGGTTTT CGTAACAATG CCAGTTACGA CCGCTGGTGG GAGGGGCGTA AACAGTGGGG GCAGTTAGTG GTGGCGTCTC GTAGTTTATC CCGTCAATTG ATGTCCTACA TTGATAGCAG TGAAAAAGCG GGCATCGAGG CGCAAGAATA TACCATCAAG CTCAGCATAG CGTTTTCTCA CGCACTGCGA CACCAGCTTC GCCAGACTGA CCCATGGCCC GATATACAAC AGTATGTCAC CGAGCAAGAC ACAGTATGTC TGCGCCAAGC AAACAGTTTA CCGGATGCGA TATTACGTAT GATCGCGCTA AAAATCAGGC AGTGCCGAGA GCAAGGCTTG TTGTCAGACA TTTTGCAAGC GAGCTTAAAT GAGCACATTA CCGCAATGGC TGAAGTACAG GCGGCATGTG AGCGCATTCA GACTACGCCG TTGCCATTTG CGTATATGTT ACTGGTGCAG CGCACAGCCT ATTTGTACTG CTTTATTTTA CCTTTTGGTA TTGTGGCCTC CCAAGGATTA GTCACGCCTT TGTTCAGTGC CATTATTGCC TACACTTTTT TTGGTTTAGA TGCATTAAGC GAAGAGTTGG CCGCGCCTTT TGGCCTGTCT GCCAATCATC TGCCTTTGCA TGCTATTTCT CGCACGATAG AAATTAATCT GCTGGATGTA TTAGGGGAAA AGCCATTGCC TGAACCTATC GAAGCAGAAA ATCACCGCCT AGCCTAG
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Protein sequence | MIVRDTPHSF RLFFILRGSV LPLIYGKILF ITLLGVAVAV AQHFYPKIFP DFTLAPVALF GVALSLFLGF RNNASYDRWW EGRKQWGQLV VASRSLSRQL MSYIDSSEKA GIEAQEYTIK LSIAFSHALR HQLRQTDPWP DIQQYVTEQD TVCLRQANSL PDAILRMIAL KIRQCREQGL LSDILQASLN EHITAMAEVQ AACERIQTTP LPFAYMLLVQ RTAYLYCFIL PFGIVASQGL VTPLFSAIIA YTFFGLDALS EELAAPFGLS ANHLPLHAIS RTIEINLLDV LGEKPLPEPI EAENHRLA
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