| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1438 |
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| Symbol | |
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| ID | 4173595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1728300 |
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| End bp | 1729424 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054448 |
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| Product | zinc-binding alcohol dehydrogenase |
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| Protein accession | YP_661015 |
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| Protein GI | 109897760 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATC AATTTATAAA ATCTAAAGCC GCCATTGCTT GGGGCCCTAA GCAGCCATTG
TCGATTGAGG AAGTTGACGT CATGCTTCCG CGCAAAGGCG AAGTACTGAT TAAGGTGATA
GCTTCTGGTG TGTGCCACAC TGATGCGTTC ACTTTGTCTG GTGAAGATCC AGAAGGAATT
TTCCCGGTTA TTCTGGGCCA CGAAGGTGGC GGTATTGTTG AGCAGGTAGG TGAGGGCGTT
ACCAGCGTGT CGGTTGGCGA TCATGTTATT CCTCTTTACA CCCCTGAGTG CGGTGAATGT
AAATTCTGTT TGTCTGGTAA AACGAATCTT TGTCAAAAAA TTCGGGAAAC CCAAGGTAAA
GGCCTGATGC CTGACGGCAC CACGCGTTTT TATAAAGATG GCCAGCCTAT CTTCCATTAC
ATGGGGTGTT CAACGTTTTC TGAGTACACT GTGTTGCCTG AAATTTCATT GGCAAAAGTG
AACAAAGATG CCCCCTTAGA AGAAGTCTGT TTGCTAGGCT GCGGTGTGAC TACAGGCATG
GGTGCGGTCA TGAACACCGC AAAAGTAGAA GAGGGCGCCA CAGTGGCCAT CTTCGGTTTG
GGTGGCATTG GCTTGTCAGC GGTCATTGGT GCAACCATGG CTAAAGCCAG TCGTATCATT
GCTATCGATA TAAATGAAAG TAAATTTGAA TTAGCCAAGA AATTGGGGGC AACTGATTTT
ATTAATCCAA AAGATTATGA CAAACCCATA CAAGACGTGA TTGTTGAGCT AACAGATGGG
GGCGTTGACT ACTCGTTCGA GTGTATCGGC AACGTCAATT TAATGCGCTC TGCACTTGAG
TGCTGCCACA AAGGTTGGGG CGAGTCTGTG ATCATCGGTG TGGCCGGTGC TGGGCAAGAA
ATTGCAACCC GCCCATTCCA GTTAGTGACA GGTCGTGTAT GGCGCGGCTC TGCATTTGGT
GGCGTGAAAG GGCGCTCTGA ATTGCCAGAT TATGTAGAGC GTTATTTGCA AGGTGAGTTC
AAACTGAGCG ATTTCATCAC CCATACAATG GGCCTTGAAG ACATCAATGA ATCTTTCGAC
TTGATGCACA AAGGCGAAAG TATTCGCAGC GTCATTCACT TCTAA
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| Protein sequence | MSDQFIKSKA AIAWGPKQPL SIEEVDVMLP RKGEVLIKVI ASGVCHTDAF TLSGEDPEGI
FPVILGHEGG GIVEQVGEGV TSVSVGDHVI PLYTPECGEC KFCLSGKTNL CQKIRETQGK
GLMPDGTTRF YKDGQPIFHY MGCSTFSEYT VLPEISLAKV NKDAPLEEVC LLGCGVTTGM
GAVMNTAKVE EGATVAIFGL GGIGLSAVIG ATMAKASRII AIDINESKFE LAKKLGATDF
INPKDYDKPI QDVIVELTDG GVDYSFECIG NVNLMRSALE CCHKGWGESV IIGVAGAGQE
IATRPFQLVT GRVWRGSAFG GVKGRSELPD YVERYLQGEF KLSDFITHTM GLEDINESFD
LMHKGESIRS VIHF
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