| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1421 |
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| Symbol | |
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| ID | 4173561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1704267 |
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| End bp | 1706873 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054431 |
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| Product | aconitate hydratase |
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| Protein accession | YP_660998 |
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| Protein GI | 109897743 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG ATTACCGTAA ACCTCTTCCA GGCACCCAGC TTGACTATTT TGATACTCAA
GCAGCCGTGG ATGCCATTAC CCCTGGCGCT TATGCCAAAT TACCTTATAC CTCACGGGTG
CTCGCTGAAA ATTTGGTAAG ACGCTGTGCC CCTGAACAAC TCACCGACTC GCTTAAGCAG
TTGATTGATC GTAAACGTGA CTTGGACTTT CCTTGGTTTC CAGCACGCGT GGTGTGCCAC
GATATTCTTG GGCAAACGGC GCTGGTTGAC TTAGCGGGAT TGCGCGATGC CATCGCTGAA
AAAGGCGGTG ACCCGTCAAA AGTGAATCCA GTAGTGCCCA CCCAGTTGGT GGTGGATCAC
TCATTGGCCG TTGAATACGG TGGTTTTGAT AAAGACGCGT TTGAGAAAAA TCGCGCGGTA
GAGGACAGAC GCAACGAAGA CCGCTTTCAT TTTATTCAAT GGACCAAAAC CTCGTTTAAA
AACGTCGATG TTATTCCCTC AGGTAACGGC ATTTTGCATC AAATTAACCT TGAGCGTATG
TCGCCAGTGG TGCAAAAGCT AAATGGCGTG GCCTTTCCGG ATACGTTAGT GGGCACCGAC
AGCCACACAC CCATGGTCGA TGCCCTTGGC GTGATGTCGA TTGGTGTCGG TGGCCTTGAA
GCAGAAAGCG TTATGCTTGG GCGAGCTTCT TATATGCGCC TACCAGATAT TATCGGTGTG
GAATTGACAG GCCGGCCGCA AGCGGGGATC ACCGCCACCG ATGTGGTGTT GGCATTGACC
GAATTTTTAC GTAAAGAAAA AGTGGTGTCG TCGTATCTAG AGTTTTACGG CGAAGGCACT
AAGCACCTGA CCTTGGGTGA CCGCGCAACC ATTTCAAACA TGACCCCAGA ATACGGCGCC
ACCGCAGCCA TGTTCTACAT CGACCGTCAA ACCATTGATT ATTTGACTCT CACCGGCCGT
GATGACGAGC AGGTGAAATT GGTTGAAACC TACGCAAAAC ACACTGGTTT GTGGGCTGAT
AGCCTTGAAA CTGCTGAGTA CGAGCGTGTA CTGACATTTG ATTTATCGAC TATTGGGCGC
AATATTGCTG GGCCGTCGAA TCCTCATAGT CGCGTTCCCA CCTCTGAATT GGCCGAACGT
GGTATCAGTG GGGTGATAGA AAACGAAGAA GGCAAAATGC CCGATGGCGC TGTTATTATT
GCGGCGATAA CCAGTTGTAC CAACACCAGT AACCCGCGCA ACATGGTGGC GGCTGGCTTA
ATTGCTCGCA ATGCCAACAA GCTTGGCTTA ACGCGTAAGC CTTGGGTAAA AAGCTCTTTG
GCACCTGGCT CAAAAGCGGT GCAGCTGTAT TTAGAAGACG CCAAATTATT GCCTGAGCTA
GAACAACTCG GGTTTGGCGT GGTGGCATTT GCTTGTACAT CATGTAACGG CATGAGCGGT
GCGCTTGACC CGGTGATCCA ACAGGAAATT ACTGATCGCG ACCTATACAC AACGGCTGTG
TTGTCGGGTA ACCGTAACTT TGATGGGCGT ATTCACCCTT ATGCGCAGCA AGCGTTTTTG
GCGTCCCCCC CTTTAGTCGT GGCGTATGCT ATTGCCGGTA CTATTCGTTT TGATATCGAA
AGGGATATTT TAGGCCATGA TAAAAACGGT AATCCAGTCA CGCTAAAAGA TATTTGGCCT
ACCGATCAAG AGATTGATGC GGTCGTCAAA GCTAGCGTTA AACCTGAGCA GTTCCGCAAA
GTGTACGAGC CCATGTTTGA TTTAAAAGTG GAGTATGGCG CGCACATCAA CCCTCAGTAC
GATTGGCGCC CACAAAGTAC TTATATTCGT CGTCCTCCTT ATTGGGAAGG GGCCTTAGCC
GGCGAGCGTG CCATGAAGGG CTTACGTCCA TTGGCGGTGT TGGGCGACAA CATCACTACG
GATCACTTAT CGCCTTCAAA CGCTATTCAA TTAAACAGCG CGGCAGGTGC CTATTTGCAC
AAAATGGGGT TGCCCGAAGA AGACTTTAAC TCTTACGCGA CCCACAGGGG CGACCACTTA
ACCGCGCAGC GCGCAACGTT TGCAAATCCT AAACTGTTTA ATGAAATGGT GCGTGAAGTC
GGTGCTGACG GGAAAAGTAA GGTCAAACAA GGCTCGCTAA CGCGTTTAGA GCCACAGGGT
ACAGAAATGC GTATGTGGGA AGCGATTGAA ACCTACATGC AGCGCAAGCA GCCACTGATT
ATTGTGGCGG GTGCGGATTA TGGTCAGGGT TCATCCCGTG ACTGGGCAGC CAAAGGTGTA
CGTTTAGCGG GTGTTGAAGT GATTGTTGCC GAAGGTTTTG AGCGTATTCA CCGTACTAAC
TTGATTGGTA TGGGCGTATT ACCGCTGGAG TTTATGCCGG GAGATAACCG TCACACGTAT
CAGATAGATG GCAGTGAAAC CTATGATGTA GTAGGTGAGC GCAAGCCAGG TGCACAAATG
ACCCTGAACA TTACCCGCAA AAACGGTGAG CAGGTGAGTG TGCCGGTCAA GTGCCGTATT
GATACCCAAG AGGAATCGTC CATCTATGAA GCGGGCGGTG TGCTACAACG CTTCGCGCAA
GACTTTCTTG AAGCGACAGT AGGGTAA
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| Protein sequence | MNTDYRKPLP GTQLDYFDTQ AAVDAITPGA YAKLPYTSRV LAENLVRRCA PEQLTDSLKQ
LIDRKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAE KGGDPSKVNP VVPTQLVVDH
SLAVEYGGFD KDAFEKNRAV EDRRNEDRFH FIQWTKTSFK NVDVIPSGNG ILHQINLERM
SPVVQKLNGV AFPDTLVGTD SHTPMVDALG VMSIGVGGLE AESVMLGRAS YMRLPDIIGV
ELTGRPQAGI TATDVVLALT EFLRKEKVVS SYLEFYGEGT KHLTLGDRAT ISNMTPEYGA
TAAMFYIDRQ TIDYLTLTGR DDEQVKLVET YAKHTGLWAD SLETAEYERV LTFDLSTIGR
NIAGPSNPHS RVPTSELAER GISGVIENEE GKMPDGAVII AAITSCTNTS NPRNMVAAGL
IARNANKLGL TRKPWVKSSL APGSKAVQLY LEDAKLLPEL EQLGFGVVAF ACTSCNGMSG
ALDPVIQQEI TDRDLYTTAV LSGNRNFDGR IHPYAQQAFL ASPPLVVAYA IAGTIRFDIE
RDILGHDKNG NPVTLKDIWP TDQEIDAVVK ASVKPEQFRK VYEPMFDLKV EYGAHINPQY
DWRPQSTYIR RPPYWEGALA GERAMKGLRP LAVLGDNITT DHLSPSNAIQ LNSAAGAYLH
KMGLPEEDFN SYATHRGDHL TAQRATFANP KLFNEMVREV GADGKSKVKQ GSLTRLEPQG
TEMRMWEAIE TYMQRKQPLI IVAGADYGQG SSRDWAAKGV RLAGVEVIVA EGFERIHRTN
LIGMGVLPLE FMPGDNRHTY QIDGSETYDV VGERKPGAQM TLNITRKNGE QVSVPVKCRI
DTQEESSIYE AGGVLQRFAQ DFLEATVG
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