| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1337 |
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| Symbol | |
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| ID | 4172801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1600972 |
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| End bp | 1603548 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054344 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_660917 |
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| Protein GI | 109897662 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.184939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTAG ATAGTTTTAC CAGCAAGTTT CAACTTGCCA TTTCCGATGC TCAATCAATA
GCGCTTGGGC GTGACCATCA ATATATTGAA CCCGTGCACT TGATGACGGC TTTGTTAAAC
CAACAAGGCG GCTCAGTGCG TTCGCTTTTC GATCATGCCA AATTGAATGT GAATACCTTA
CGATCGGCGT TAGCAGAGGC TGTAGATCAC CTACCGCGTG TTGAAGGCGT AGGCGGTGAC
GTTCAGTTAG CGAAAGAAAC GGTAGTGCTG TTAAATTTGA GCGACAAAAT CGCCCAAAAA
CGTAAAGATA AATACATTAC CTCTGAAATT TTCGTTTTGG CTGCAGTACA AGATAAAGGC
AAGCTCGGCG AGATCTTACG CCAAGTTGGC GCCACTGAAG AGTCTATCGA CAAAGCAATC
GAAGCAATGC GTGGCGGGCA AACCGTCAAT GATCCGAATG CTGAAGATGT GCGCCAAGCA
CTCGAGAAAT TTACGACTGA TCTGACTGAG CGCGCAGAGC AGGGCAAACT AGACCCTGTG
ATTGGTCGAG ACGATGAAAT TCGCCGTACT ATCCAAGTTT TGCAGCGTCG TACCAAAAAC
AACCCCGTAC TGATTGGACA GCCTGGTGTG GGTAAAACTG CCATCGCTGA GGGGCTTGCC
CAGCGTATCA TTAACTCTGA AGTACCTGAG GGGCTCAAAA ACAAGCGAGT GTTATCTCTT
GATATGGGCG CATTAATCGC GGGTGCTAAG TTTCGCGGTG AATTTGAAGA ACGTTTGAAA
GCCGTTCTAA ACGAGCTGGC TAAAGAAGAA GGCCGCGTTA TTCTGTTTAT CGATGAATTG
CATACCATGG TCGGTGCAGG TAAAGGTGAA GGCGCAATGG ATGCCGGTAA CATGCTAAAA
CCTGCGCTGG CTCGCGGCGA GCTACACTGT GTTGGTGCTA CCACACTAGA TGAGTACAGG
CAGTTTATCG AGAAAGATGC AGCATTAGAG CGTCGCTTCC AAAAAGTACT GGTAGATGAG
CCGAGTGTTG AAGACACCGT TGCGATATTA CGCGGGTTAA AAGAGCGTTA TGAATTACAC
CATTCGGTAG AGATAACAGA CCCTGCTATT GTGGCAGCGG CGTCGTTATC GCACCGCTAT
ATAAGTGATC GTCAATTACC AGATAAAGCG ATTGATCTTA TCGATGAAGC AGCGTCAAGC
ATTCGTATGC AAATGGATTC TAAACCTGAA GACATGGACA GGCTAGAGCG ACGTATCATT
CAGTTAAAAT TGGAAGAGCA AGCGCTGGCC AAAGAAAAGG ATGAAGCGAG TCACAAACGC
TTAGAGCTGA TCGAGATCGA GCGAGAACAA GCGGAAATTA AGTTTTCTGA ATTAGAGAAA
ATTTGGAAAT CAGAAAAGCA AGCCATGCAA GGGACACAAA ATATTCGTGC AGAGTTAGAC
CAAGCGAAAT TAGATTTGGA GATTGCGCGC CGTGCATCCG ATCTAAGCCG TATGTCTGAA
CTGCAATATG GCCGGATCCC TGAACTTGAA AGTAAGTTAG AGCTAGCCAC AGAATCTGAA
TCGCAACCAC TGGAGCACCA ACTTCTTAAA AATCGAGTAA CAGAAAGTGA AATTGCTGAT
GTGCTTTCAC GTTGGACAGG CATCCCAGTA TCGAAAATGC TTGAAGGTGA GAAAGACAAA
CTTATGAGTA TGGAAGCGGC CTTGCATGAG CGTGTAGTGG GGCAAAGTGA AGCCGTGAAT
GCGGTGTCTA ATGCGATACG TCGCTCTAGA GCTGGCCTTG CGGACCCGAA TAAACCGATT
GGTTCGTTTT TGTTTTTAGG GCCAACCGGT GTAGGTAAAA CTGAGCTTTG CAAAACCTTG
GCTAATTTCT TGTTTGACAC AGAAGACGCC ATGGTGCGTA TCGACATGTC AGAGTTTATG
GAAAAGCACT CCGTTTCCAG GTTAGTGGGT GCACCTCCAG GCTATGTTGG CTATGAAGAA
GGGGGGTACT TAACCGAAGC AGTTAGACGT AAACCTTACT CAGTCATTTT GCTAGATGAA
ATCGAGAAGG CCCACCCTGA TGTGTTTAAC ATTTTGCTTC AAGTGCTAGA TGACGGCCGT
TTGACCGACG GGCAAGGGCG TACGGTTGAT TTCAAAAATA CCGTTATCAT CATGACCTCT
AACTTGGGCT CTGACATCAT TCAAGAGCAG CACAGTGAAA ATGATTACGA GAAAATGAAG
CAATCTGTAC TGAACGTGCT GAGCACGCAC TTCAGACCTG AGTTTTTGAA CCGTGTTGAT
GAAACGGTTG TGTTCCACCC ACTCGGCTTG GCGCAAATTA CATCAATTGC GAGTAAGCAA
TTACAGTTTT TGCGCAACCG TTTAGAAGAG AAGGGGATTG GGTTGGAGTT AACCGACGCT
GCCCTTAAGA AAATCGCTGA AGCAGGGTTT GATCCCGTGT ATGGAGCCCG CCCACTTAAA
CGCGCGATCC AGATGGAAAT TGAAAACCCA TTAGCACAAA AAATTCTGTC AGGTAAATTG
GTGTCAGAAG GTGTGGTAAG CATTGATGCC GATGAGAATG GGCTAATCAT CGACTAG
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| Protein sequence | MRLDSFTSKF QLAISDAQSI ALGRDHQYIE PVHLMTALLN QQGGSVRSLF DHAKLNVNTL
RSALAEAVDH LPRVEGVGGD VQLAKETVVL LNLSDKIAQK RKDKYITSEI FVLAAVQDKG
KLGEILRQVG ATEESIDKAI EAMRGGQTVN DPNAEDVRQA LEKFTTDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVLIGQPGV GKTAIAEGLA QRIINSEVPE GLKNKRVLSL
DMGALIAGAK FRGEFEERLK AVLNELAKEE GRVILFIDEL HTMVGAGKGE GAMDAGNMLK
PALARGELHC VGATTLDEYR QFIEKDAALE RRFQKVLVDE PSVEDTVAIL RGLKERYELH
HSVEITDPAI VAAASLSHRY ISDRQLPDKA IDLIDEAASS IRMQMDSKPE DMDRLERRII
QLKLEEQALA KEKDEASHKR LELIEIEREQ AEIKFSELEK IWKSEKQAMQ GTQNIRAELD
QAKLDLEIAR RASDLSRMSE LQYGRIPELE SKLELATESE SQPLEHQLLK NRVTESEIAD
VLSRWTGIPV SKMLEGEKDK LMSMEAALHE RVVGQSEAVN AVSNAIRRSR AGLADPNKPI
GSFLFLGPTG VGKTELCKTL ANFLFDTEDA MVRIDMSEFM EKHSVSRLVG APPGYVGYEE
GGYLTEAVRR KPYSVILLDE IEKAHPDVFN ILLQVLDDGR LTDGQGRTVD FKNTVIIMTS
NLGSDIIQEQ HSENDYEKMK QSVLNVLSTH FRPEFLNRVD ETVVFHPLGL AQITSIASKQ
LQFLRNRLEE KGIGLELTDA ALKKIAEAGF DPVYGARPLK RAIQMEIENP LAQKILSGKL
VSEGVVSIDA DENGLIID
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