| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1290 |
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| Symbol | |
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| ID | 4173338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1551977 |
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| End bp | 1552903 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054297 |
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| Product | ubiquinol oxidase, subunit II |
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| Protein accession | YP_660870 |
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| Protein GI | 109897615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAGGG GAAATCCTTT GTTGATCCGT AAGTTAGGTT ATTCAGCGTT GACGGCAAGC
ATATTATTGC TGTCGGGCTG TGAAGGTGGT GTGCTTGATC CTAAAGGTCA GGTGGGCATC
GATGAAAAGT ATTTGATCGT TGTAGCAACG GTACTGATGC TGCTGGTGGT TATTCCTGTT
ATTGGCATGA CCTTGTATTT CGCTTGGCGT TATCGTGAAG GTCGCGAGCA TGAAATTTAT
GACCCAAAGT GGGCACACTC AACCAAAATT GAAGTGGTTG TGTGGTTAAT CCCCATTGTG
ATTATTGCGA TATTGGGCAC CTTGACCTGG TACTCCACTC AAGAGCTCGA CCCTTACAAG
CCGTTAGATC ACGAGCATAA ACCCATCACT ATTCAAGTGG TGTCTTTGAA CTGGAAATGG
CTATTCATCT ATCCAGAGCA AGGTATCGCA ACGGTTAACG AAGTGGTGTT TCCCAAAGAT
GTGCCCGTGG AATTTAAGAT CACATCTGAT ACCACCATGA ACTCGTTCTT TATTCCTCAG
CTTGGTAGCC AGATTTATTC TATGGCAGGT ATGACGACAC GTCTTAACCT GATCGCCAAC
GAAGCGGGCG AGTTTGACGG CATTTCAGCC AACTACAGTG GTGCCGGGTT CACCGGAATG
AAATTTAAAG CCATCGCTAA AAACAGCGAA CAGGACTTTG AGCAATGGGT CAGCGCGGTT
AAACACAGCC CTGCAAAACT GGGTGATGTG AGTTATGCCC AGTTAGCAAA GCCAAGTGAA
AATAATCCCG TTAATTATTA CGGCTCGGTG GACAGTCAAC TGTTCCAACA TATTGTGATG
CAGTTTATGG GCAACATGCA TTCCCATGAT ATGCATGAAG ACCATCAAGA GCATTCTGCT
CAAATGCACA TGCAGGCGGA GGAGTAA
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| Protein sequence | MGRGNPLLIR KLGYSALTAS ILLLSGCEGG VLDPKGQVGI DEKYLIVVAT VLMLLVVIPV
IGMTLYFAWR YREGREHEIY DPKWAHSTKI EVVVWLIPIV IIAILGTLTW YSTQELDPYK
PLDHEHKPIT IQVVSLNWKW LFIYPEQGIA TVNEVVFPKD VPVEFKITSD TTMNSFFIPQ
LGSQIYSMAG MTTRLNLIAN EAGEFDGISA NYSGAGFTGM KFKAIAKNSE QDFEQWVSAV
KHSPAKLGDV SYAQLAKPSE NNPVNYYGSV DSQLFQHIVM QFMGNMHSHD MHEDHQEHSA
QMHMQAEE
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