Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1284 |
Symbol | |
ID | 4173332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1544338 |
End bp | 1547061 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638054291 |
Product | aconitate hydratase 1 |
Protein accession | YP_660864 |
Protein GI | 109897609 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAG CTTCCCCTTA TCTAAAAACA TTGACCCTCG AGGGTGAACA ATTCTCTTAT TATGCCCTTG ATGCCCTCTC AGATACCCAC AATATCGAGC GACTGCCTTT CGCCGCTAAA ATATTGTTAG AAAACCTCTT GCGCCACAGT GCTGAAAACT TTGTTCAAGA AGAAGATATC AACAAACTCG CCACCTGGGA TATTAATGAC CAGTCAACGA CTGAGATTGC TTTCGTTCCT TCTCGAGTGG TGCTACAAGA TTTTACCGGC GTACCGGCGG TAGTTGACTT AGCCGCCATG CGCGATGCCA TGGTTGATTT AGGAGGCGAC CCGCAAAAAA TTAATCCGTT AAAACCCGTG GAATTGGTTA TTGACCACTC CGTCATGGTG GATTATTTCG CCCAAGACGA TGCCTTCGAC AAGAATACCG CGATGGAAGT GCAGCGTAAT AAGGAACGCT ATCAGTTCTT ACGCTGGGGT CAGCAGGCGT TTGACAATTT TAAAGTGGTT CCGCCAGGTA AAGGCATTGT GCATCAGGTG AACTTAGAAT ATCTGGCACG TGTCACCTTT ATTGAAGAGC AACACGAGCA GCCGTTACTT TATCCAGATA CCCTAGTAGG CACAGATTCC CACACGACCA TGATCAACGG CTTAGGCATT TTGGGCTGGG GTGTAGGCGG CATTGAGGCT GAAGCCGCCA TGTTAGGTCA GCCAGTCACC ATGCTGATAC CTGAGGTAGT TGGCATGGAA ATTACCGGCA GTTTGCCGCC CGGTACCACG GCGACAGATT TAGTATTGAC CATTACTCAA AAGCTACGCG AATTTGGCGT CGTCGGTAAA TTTGTCGAAT TTTACGGCGA AGGGGTAAAA CACCTCACTA TAGCCGACAG AGCTACCATA GCGAACATGG CACCAGAGTA CGGTGCAACG TGTGGTATCT TCCCGCTAGA CGAACAAACC GAAACCTACC TGCGTTTGAC TGGCCGCGAA GAGCGCAATA TTAATGTGAT CAAAGCGTAT GCACAAGCAC AAGGCATGTG GGGCAGCGAA GCTCAGCAAA GCGCAATCTA TCATGCGAAT CTACACATTG ACCTTAGTGA TGTAGTAACC TCGATTGCGG GACCTAAACG CCCCCAGGAT AGGATCCCGT TAAGTGAAGC TGCAGACAAG TTCAGTACGT GGTTATCTGA GCAGGAAAAA TTGATTATCA CCACCGAAGA TCCCGAGAAA GGGCGTTTCG AATCAGAAGG TGGCCATCAA GCAGAGAAAA GTGAGGACTC CTCAGAGGTC GAATACAATG GTCAGCGTTT CAGCCTTAAC GACGGCGCAG TCGTGATAGC GGCCATCACC AGTTGTACCA ATACCTCCAA CCCTTCTGTG CTGATTGCTG CCGGCTTACT GGCCAAAAAA GCCAGTGAAA TGGGTCTGAC CGTAAAACCA TGGGTGAAAA CCAGCTTTGC GCCTGGCTCT CAAGTCGTCA CCGAATACCT TAATAAGGCT AACCTAACCC ACGAACTCGA AAATTTAGGC TTTCATCTAG TCGGATACGG CTGTACTACC TGCATAGGCA ACTCGGGGCC ACTGCCCGAG CCTATCAGCG CTGCTATTCG TAAAGAAAAG CTAAATGTAA CTTCCGTGCT ATCAGGCAAT CGTAATTTTG AAGGTCGTAT TCACTCAGAC GTAAAAGCTA ATTACCTTGC CTCTCCTCCG TTAGTTATCG CATATGCGCT AGCCGGAAAT ATGCAGATTG ACTTGCTCAA AGAGCCCCTT GGCTCCAGTA AAGACGGTAA GCCCGTTTAC TTGCGTGATA TTTGGCCAAG CAATGAAGAG ATTCAAGCGC TTGTGACTGA TGTGGTCAAT AGCGACATGT TCTCTGAACG TTATAGCCAT ATTTTTGAGG GTGACGAGAC ATGGAACAAT TTAGACGTGG TCGATAGCGA GCAATATAAT TGGCCTGAAT CAACTTACGT TAAAAAGCCC ACCTTTTTCG ATGGCATTCA GCAACACCCC GAAGCGATCA GTGCTATTAA AGATGCTCGC TGCTTGTTGA AACTCGGCGA CACGGTCACG ACGGATCATA TTTCTCCAGC CGGTAGCATT GCCCCTGATG GCCCTGCTGC GCAATACCTG CAAGCGCACG GTGTTGAGGA GCACGACTTC AACTCTTTTG GCTCACGCCG AGGAAATCAC GAAGTTATGA TGCGTGGAAC ATTCGCCAAT GTCAGATTGA AAAATCAACT CGCCCCCGGT ACAGAAGGCG GCTGGACGCG CTTTCAACCA TCAGCTGAAC AGATGTCTGT ATTTGATGCA GCAATGAAGT ATCAAGAACA AGGCACGCCA ACGGTGGTAA TTGCGGGCAA AGAGTACGGC ACAGGGAGTT CTCGCGACTG GGCCGCAAAA GGTCCACTGT TGCTCGGTGT CAAAGCGGTA ATTGCCGAGA GCTACGAACG AATTCATCGC TCTAATCTGA TAGGTATGGG TATTCTACCC CTACAATTTA AATCAGGCGA CAGTGCCGCC AGTTTGAAGT TAGACGGCAC GGAGCAGTAC TCGATTGACG CCATAGATGG AGATCAAAAA GAAGTAGTGG TATCGGTAAA AGGCGAACAA GGAGAATTCA CCTTTGACGC GCAGATCCGC ATCGATACCC CCAATGAGTT CAGTTACTTC AATGACGGTG GCATTCTTCA ATATGTACTG CGAAGCCTGA ATAAAAGTGT TTAG
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Protein sequence | MQQASPYLKT LTLEGEQFSY YALDALSDTH NIERLPFAAK ILLENLLRHS AENFVQEEDI NKLATWDIND QSTTEIAFVP SRVVLQDFTG VPAVVDLAAM RDAMVDLGGD PQKINPLKPV ELVIDHSVMV DYFAQDDAFD KNTAMEVQRN KERYQFLRWG QQAFDNFKVV PPGKGIVHQV NLEYLARVTF IEEQHEQPLL YPDTLVGTDS HTTMINGLGI LGWGVGGIEA EAAMLGQPVT MLIPEVVGME ITGSLPPGTT ATDLVLTITQ KLREFGVVGK FVEFYGEGVK HLTIADRATI ANMAPEYGAT CGIFPLDEQT ETYLRLTGRE ERNINVIKAY AQAQGMWGSE AQQSAIYHAN LHIDLSDVVT SIAGPKRPQD RIPLSEAADK FSTWLSEQEK LIITTEDPEK GRFESEGGHQ AEKSEDSSEV EYNGQRFSLN DGAVVIAAIT SCTNTSNPSV LIAAGLLAKK ASEMGLTVKP WVKTSFAPGS QVVTEYLNKA NLTHELENLG FHLVGYGCTT CIGNSGPLPE PISAAIRKEK LNVTSVLSGN RNFEGRIHSD VKANYLASPP LVIAYALAGN MQIDLLKEPL GSSKDGKPVY LRDIWPSNEE IQALVTDVVN SDMFSERYSH IFEGDETWNN LDVVDSEQYN WPESTYVKKP TFFDGIQQHP EAISAIKDAR CLLKLGDTVT TDHISPAGSI APDGPAAQYL QAHGVEEHDF NSFGSRRGNH EVMMRGTFAN VRLKNQLAPG TEGGWTRFQP SAEQMSVFDA AMKYQEQGTP TVVIAGKEYG TGSSRDWAAK GPLLLGVKAV IAESYERIHR SNLIGMGILP LQFKSGDSAA SLKLDGTEQY SIDAIDGDQK EVVVSVKGEQ GEFTFDAQIR IDTPNEFSYF NDGGILQYVL RSLNKSV
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