| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1267 |
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| Symbol | |
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| ID | 4173278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1519371 |
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| End bp | 1520156 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054274 |
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| Product | lipase, class 3 |
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| Protein accession | YP_660847 |
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| Protein GI | 109897592 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3675] Predicted lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAC TCAAACGCTA CCAATACGAA CGCTATGCAG TGTTGTGCAA GCTGGCTTAT
CCAAAAACCT TTGATCATGT GGCGTTAGGA TTCGCTGAGC AGGGTCACGT CGCCATCAAA
AACAGGCAGG GGCATGTATT GGCGCGTATT TTGTGGCAAG ACAAAAAGAA AGAAGTAATA
GTTGTCTTTC GCGGCTCTCA AGTGCTGAGC GACTGGCTGA CAAATTTGTG TTGCTTCCCT
AAGCGCAAGC GTTTCAACAA GACCGTTTAT TACATTCATT ACGGTTACGA TAGGTTGCTC
AATCAAAAAG TAGCAGGAGC GGTGCCTGAA GAAGAGGCAT TGAGTATTTA TCAGCAGATT
GAAAAGGTAC TGACCCCTTT AATCGCGAGC GGTAAGCGGA TCAGTTTAAC AGGCCATTCA
TCCGGCGGGG CGATGGCTAT TTTAACCGCA GACTGGCTTG AGCGGCGTTT TGACTCCCCC
GTGCGCAGAG TCGTGACGTT CGGACAGCCA TCTACGGGAT TCAGAAGCTT TAATAAGCAT
TATATGTTGC ACCGCCGTAC TTATCGCATT TGCTGCGATT TGGACATTAT TACGTTTTTA
CCGCCTCTGC CGGGCATATT TAAACATGTG GGGCGTAATC TTTGGCTGCA TAATGAGCGA
ATATACGAAA ACATTCGGCC GTCAGTGCGG CTATATAAAA CACTCACCAG CTGGCTTATC
TCTCCTATTT CTTATCATTA CATGCACAAG TACATACGAA ACAAAGACTT TTTTGATAAG
CACTGA
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| Protein sequence | MKKLKRYQYE RYAVLCKLAY PKTFDHVALG FAEQGHVAIK NRQGHVLARI LWQDKKKEVI
VVFRGSQVLS DWLTNLCCFP KRKRFNKTVY YIHYGYDRLL NQKVAGAVPE EEALSIYQQI
EKVLTPLIAS GKRISLTGHS SGGAMAILTA DWLERRFDSP VRRVVTFGQP STGFRSFNKH
YMLHRRTYRI CCDLDIITFL PPLPGIFKHV GRNLWLHNER IYENIRPSVR LYKTLTSWLI
SPISYHYMHK YIRNKDFFDK H
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