Gene Patl_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1250 
Symboltsf 
ID4173261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1499371 
End bp1500243 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content45% 
IMG OID638054257 
Productelongation factor Ts 
Protein accessionYP_660830 
Protein GI109897575 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA CAGCAGCCCT AGTTAAAGAA TTACGCGAGC GTACCGCTGC AGGTATGTTG 
GATTGTAAAA ATGCACTAGT TGAAGCTAAC GGTGACATCG AGCTAGCAAT CGAAAACATG
CGTAAAAATG GCCAAGCAAA AGCGGCTAAA AAAGCAGGTC GTATCGCCGC TGAAGGCGTT
ATCTTGACCA AAGTTGCTAA CGGTGTAGCA ACAATGATCG AATTGAACAG TGAAACAGAT
TTCGTTGCTC GTGACGAAGG TTTCATCGCA TTCGGTAGCA AATTGATCGA AGTGGCGTCT
GCTAACAAAA TCAATGACAT TGAAACGTTG AACGATTCAG TGGTTGACGG CGTTAAAGTA
AGTGACGCAC GTGACACTTT GGTTGCTAAA ATTGGCGAAA ACATTTCTCC ACGTCGTGTT
ATTTCTGTTG AAGGTGATAA CCTTGGCGCA TACGTACACG GCGGCCGCAT CGGCGTTATC
GCTATCCTTC AAGGTGGCGA CGAAGAGCTT GCAAAAGACA TCGCTATGCA CGTTGCAGCA
GCTAACCCTC AGTTTGTTAA GCCAACTGAT GTACCAGCTG AAGTTGTTGC TAAAGAAAAA
GAAATTCAAC TTGATATCGC TATGCAGTCA GGCAAGCCTG CTGACATCGC TGAGAAGATG
GTTTCTGGTC GCATGAACAA GTTCACTTCT GAAGTAAGCC TAACAGGTCA AGCTTTCATT
AAAGATCCTT CAACGTCTGT AGCACAATTG CTTAAAGCGA AAAATGCTGA CGTTATCAAC
TTCGTACGTT TCGAAGTAGG TGAAGGTATT GAGAAGAAAG AAGAAGACTT TGCTGCTGAA
GTAGCTGCAC AAATGGCCGC TGCTAAGAAA TAA
 
Protein sequence
MAVTAALVKE LRERTAAGML DCKNALVEAN GDIELAIENM RKNGQAKAAK KAGRIAAEGV 
ILTKVANGVA TMIELNSETD FVARDEGFIA FGSKLIEVAS ANKINDIETL NDSVVDGVKV
SDARDTLVAK IGENISPRRV ISVEGDNLGA YVHGGRIGVI AILQGGDEEL AKDIAMHVAA
ANPQFVKPTD VPAEVVAKEK EIQLDIAMQS GKPADIAEKM VSGRMNKFTS EVSLTGQAFI
KDPSTSVAQL LKAKNADVIN FVRFEVGEGI EKKEEDFAAE VAAQMAAAKK