Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1250 |
Symbol | tsf |
ID | 4173261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1499371 |
End bp | 1500243 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054257 |
Product | elongation factor Ts |
Protein accession | YP_660830 |
Protein GI | 109897575 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTGA CAGCAGCCCT AGTTAAAGAA TTACGCGAGC GTACCGCTGC AGGTATGTTG GATTGTAAAA ATGCACTAGT TGAAGCTAAC GGTGACATCG AGCTAGCAAT CGAAAACATG CGTAAAAATG GCCAAGCAAA AGCGGCTAAA AAAGCAGGTC GTATCGCCGC TGAAGGCGTT ATCTTGACCA AAGTTGCTAA CGGTGTAGCA ACAATGATCG AATTGAACAG TGAAACAGAT TTCGTTGCTC GTGACGAAGG TTTCATCGCA TTCGGTAGCA AATTGATCGA AGTGGCGTCT GCTAACAAAA TCAATGACAT TGAAACGTTG AACGATTCAG TGGTTGACGG CGTTAAAGTA AGTGACGCAC GTGACACTTT GGTTGCTAAA ATTGGCGAAA ACATTTCTCC ACGTCGTGTT ATTTCTGTTG AAGGTGATAA CCTTGGCGCA TACGTACACG GCGGCCGCAT CGGCGTTATC GCTATCCTTC AAGGTGGCGA CGAAGAGCTT GCAAAAGACA TCGCTATGCA CGTTGCAGCA GCTAACCCTC AGTTTGTTAA GCCAACTGAT GTACCAGCTG AAGTTGTTGC TAAAGAAAAA GAAATTCAAC TTGATATCGC TATGCAGTCA GGCAAGCCTG CTGACATCGC TGAGAAGATG GTTTCTGGTC GCATGAACAA GTTCACTTCT GAAGTAAGCC TAACAGGTCA AGCTTTCATT AAAGATCCTT CAACGTCTGT AGCACAATTG CTTAAAGCGA AAAATGCTGA CGTTATCAAC TTCGTACGTT TCGAAGTAGG TGAAGGTATT GAGAAGAAAG AAGAAGACTT TGCTGCTGAA GTAGCTGCAC AAATGGCCGC TGCTAAGAAA TAA
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Protein sequence | MAVTAALVKE LRERTAAGML DCKNALVEAN GDIELAIENM RKNGQAKAAK KAGRIAAEGV ILTKVANGVA TMIELNSETD FVARDEGFIA FGSKLIEVAS ANKINDIETL NDSVVDGVKV SDARDTLVAK IGENISPRRV ISVEGDNLGA YVHGGRIGVI AILQGGDEEL AKDIAMHVAA ANPQFVKPTD VPAEVVAKEK EIQLDIAMQS GKPADIAEKM VSGRMNKFTS EVSLTGQAFI KDPSTSVAQL LKAKNADVIN FVRFEVGEGI EKKEEDFAAE VAAQMAAAKK
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