Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1213 |
Symbol | |
ID | 4172679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1462116 |
End bp | 1464290 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054220 |
Product | malate synthase G |
Protein accession | YP_660793 |
Protein GI | 109897538 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.262695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAT ATATTCAACG TGAACAATTA CAGGTAGCGC CTCAGCTTGC TGCCTTTATC GAAGAGCAGG CTCTACCTAG CAGTGAAGTC GCCCCCACAG AATTTTGGGC TGGTTTTAGT AATATTCTAG CCCAGCTCAC GCCAGTTAAT GATGCCTTAC TGGCTAAGCG CGACTTGCTA CAACAAAAAA TCGATGCGTA TTGCCAGTCT CATCCGACCT TAGAGCCTGC GAGCTACAAA ACTTTCCTTC AAGAAATTGG CTATCTAGAA ACGCCACCAG CAGATTTTTC TATTACCACC GATAACGTTG ACGACGAGGT GGCTACCATG GCCGGCCCTC AACTTGTAGT GCCTATCAAT AACGCGCGCT TCGCTCTTAA CGCTGCTAAT GCCCGTTGGG GGAGCTTATA CGATGCAGCC TACGGTACAG ATGTTATCCC TGAAGATAAC GGCGCTACGC GGACAAAAGC ATACAATCCC GCAAGAGGGC AACAGGTTAT ACAGTATGCA AGAAAGTGGC TCGATGTAAT CGCACCATTG ACCAATGGCT CCCATACCAC CAGTCAAGGT TATGATATTA CTTCAGGTCA ACTAGTGGTA ACGCTAGCCG ATGCGAGCAC AGCGACCTTG TCTCACCCTA CCCAGTTACT TGGATTTGTT GGCGATAAAA ACAACCCTAG CGCCATTTTG TTACAACATA ACGGCCTGCA CGTAGAGCTG CAATTTGACC GCACTCATCA AATAGGGCAA AGCGACCCCT GTGGCATGAA AGACATATTA GTTGAATCAG CACTGACAAC CATTATGGAT TGTGAGGACT CAGTTGCCGC AGTGGATGCT GAAGATAAAA CCTTGGTGTA TCAGAACTGG CTAGGACTGA TCAAAGGGAC GCTTGAAGTG AGCCTAAGTA AACCAGGCGG CTCCTCCGTC AGACGTTTAA GTGCCGATAG AAATTACACG ACGCTTACAG GCAAATCATT TTCGCTAAAT GGTCGTAGTA TGATGTTTGT GCGTAATGTG GGCCATTTAA TGACGAACGA CGCAATTTTG TTTCAGGGTA AGCCGATCTA CGAAGGGATA ATGGACGCGG TTATCACCAG CCTAATCGCC AAACATGACT TGCTAGGCAA TGGCCAATAT CGCAACAGTA AAGCGGGCAG TATATATATC GTTAAACCCA AAATGCATGG CTCAGAGGAA GTGGCATTCG CTGACACTTT GTTTAGTCAA GTAGAAGATG CTTTAGCACT GCCTAAAAAC ACATTAAAAA TGGGCATTAT GGACGAAGAA CGTCGCACAA GTGTGAATTT GAAAGCGTGT ATCAATGCAG CAAAAGCGCG CGCAGTATTC ATTAATACGG GCTTTTTAGA TAGAACTGGG GATGAAATCC ATACCTCAAT GCATCTAGGG CCATTTGCGT TAAAAGCTGA CATCAAGCAA CAGCCTTGGT TGACTGCCTA CGAGTTAGCC AACGTGAAAA TTGGTGTAGA CGCAGGTATG TCAGGTAAAG CGCAAATTGG GAAAGGTATG TGGCCAATTC CAGATAACAT GGCTGACATG ATGCAAAGTA AAACCAATCA CCCTCAATCG GGCGCCAACA CTGCTTGGGT TCCCTCCCCA ACCGCTGCGA CCTTGCACGC CTTACATTAT CACCAGATTG ATGTGTTTAG TTTGCGAAAT CCGATTGCAA GCAATGATTT TGATGGGTTA GATGATATCT TGACCGTGCC CCTCTTGGCT GACTGTTCCA GTTTGAGCCA GCAAGACATT CAGCATGAGC TAGACAATAA CGTTCAAGGG ATTTTGGGTT ATGTGGTTCG CTGGGTTCAT CAAGGGATTG GTTGCTCTAA AGTACCGGAC ATCAACAACG TGGGCCTAAT GGAAGACAGA GCAACGTTAC GCATATCCAG CCAGCATATC GCTAACTGGT TGTTACATGG CTTAATTAAC GAGGCACAAA TAAATGACTC AATGTTGCGC ATGGCACAAT TAGTCGATGC ACAAAATAGT TCTGATAAGG AATACATCCC TATGATGCCT GACCCAATCA AATCAATTGC GTTTCAAGCC GCTCAAGAGT TAATACTGCA AGGAACGCAG CAACCAAATG GTTACACCGA ACCTGTTTTG CACGCTAAGC GCAGGGAAAT GAAAGATAAA CTGGCCACTG TGTAG
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Protein sequence | MQQYIQREQL QVAPQLAAFI EEQALPSSEV APTEFWAGFS NILAQLTPVN DALLAKRDLL QQKIDAYCQS HPTLEPASYK TFLQEIGYLE TPPADFSITT DNVDDEVATM AGPQLVVPIN NARFALNAAN ARWGSLYDAA YGTDVIPEDN GATRTKAYNP ARGQQVIQYA RKWLDVIAPL TNGSHTTSQG YDITSGQLVV TLADASTATL SHPTQLLGFV GDKNNPSAIL LQHNGLHVEL QFDRTHQIGQ SDPCGMKDIL VESALTTIMD CEDSVAAVDA EDKTLVYQNW LGLIKGTLEV SLSKPGGSSV RRLSADRNYT TLTGKSFSLN GRSMMFVRNV GHLMTNDAIL FQGKPIYEGI MDAVITSLIA KHDLLGNGQY RNSKAGSIYI VKPKMHGSEE VAFADTLFSQ VEDALALPKN TLKMGIMDEE RRTSVNLKAC INAAKARAVF INTGFLDRTG DEIHTSMHLG PFALKADIKQ QPWLTAYELA NVKIGVDAGM SGKAQIGKGM WPIPDNMADM MQSKTNHPQS GANTAWVPSP TAATLHALHY HQIDVFSLRN PIASNDFDGL DDILTVPLLA DCSSLSQQDI QHELDNNVQG ILGYVVRWVH QGIGCSKVPD INNVGLMEDR ATLRISSQHI ANWLLHGLIN EAQINDSMLR MAQLVDAQNS SDKEYIPMMP DPIKSIAFQA AQELILQGTQ QPNGYTEPVL HAKRREMKDK LATV
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