| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1194 |
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| Symbol | |
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| ID | 4172600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1439491 |
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| End bp | 1441395 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054201 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_660774 |
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| Protein GI | 109897519 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TTGCAGGGTT TACACAATTT AGCGGGAACA TGGGTAACCA GCAAACCCTT
AAAAAAATGG GTGACAGTAT TTATCATCGT GGTCCAGACG CTGGTCGCGA ATATATCGAT
GAATACGTAG GTCTAGCCCA TCGTCGGTTG GCCATTATCG ACTTGTCAGA AGCCGGCACA
CAGCCTATGT ACTCACATGA CGAAAGATAC ATCATTGCCT TTAACGGTGA GATATATAAC
TTTCAGGCAC TTCGTGATGA CCTTGTCAGC GAAGGCTATC CATTTAAAAC CCACACGGAC
ACAGAAGTGA TCCTTGCGCT CTATGCAGCG CACGGTGAAA AGATGCTTAG CATGTTAAAT
GGCATGTTCG CATTCGCCCT TTGGGACACT ACCAGCAAGC GTTTACTCAT TGCTCGAGAT
CGCGTAGGCA AAAAGCCCCT TTATTACCTT AAAACTGACA CTCAGTTTGC GTTTGCCTCT
GAAATTAAAG CATTACTTAC ACTCCCCAAT GTGTCGCGGG AGGTCAGGCT AGACGCAGTA
CATGACTTCT TTGCTTATCA ATATGTACCA GACCCAAAAA CTATTTTCAC CGATATTCAC
AAACTGCCTC CGGCACACTT TATGTGGGTC TCGCAAGATG GGATACAGAT AGAACAATAC
TGGGATGTTT CCTTTAAGCA AACCAGCAAT CAATCTCAGA CCGAACTGAC CAAAGCACTT
TACGATTTAG CCACAGAAAA AACCTGTTCT CGTATGGTCA GTGACGTGCC CTTAGGCGCA
TTTTTGAGTG GTGGAATAGA CTCCAGTGGT GTGGTCGCTA TGATGGCGCT GAATAGCGAT
AAGCCAGTCA AAACCTGCTC AATAGGATTC GATGAAAAGC GTTTTAACGA AACCGAATTT
GCCCAAATTG TCGCTGATCA ATATAAAACC GAGCACCACG AATTTACCGT TCACCAAAAT
GTAAAAGACA ACTTAGAAGA GATAGTCGGT TATTTTGACG AGCCTTTTGC CGACCCATCT
TTAGTACCAA CGTATTTTGT TTCTCAGTTG GCACGCTCTC AGGTAACGGT AGCGATTGCC
GGTGATGGCG GCGATGAAGT ATTTGCAGGC TATGAAAAAT ACACCACAGA TGCACTGGAA
AACAAACTAC GTGAACGCTT TCCCGAAGCG CTGCGCAAGA AGGTATTCCC TAAACTCGCC
AACGTATTCG CTAAAAGTGA GCATCCACTA TTTAGAAAGG CTAAATCTCT GTTAACAAGT
TTGAGTTTAG ACCCCGCCAT GGGGTTTTAT GTGACTAACT CGATGATAGA TGATCGCCTT
TGGGAACGTT TAGCCTCATC AGATACCAAG GCTAAGTTAG GCGCTTACCA TCCAAGTGAA
GTAACACTCG AAAACTACCA CAAGGCCGAT GGGAAAGACC ACTTGTCGAA GATTTTGTAT
ACCGACATGA AGACCTACTT GCCCGGCGGC ATTTTAGTAA AAGTCGATCG TATGAGTATG
GCGCACTCCT TAGAAGTGCG TGCGCCCCTA CTAGATAAAG ACGTCATTGA ATTCTCTGCT
ACCCTGCCAT CGGATTTAAA ATATCGTGAC GGCGAGAAAA AATTCATCCT CAAAGAAGCC
TTTAAACCAG TTTTGCCTGA TGATATTTTA TATCGCAAAA AAATGGGCTT CTCGGTGCCC
TTAGCGACAT GGTTACGATG TGAAATTAAA GAACTAACCG AAGATTACTT GTTTAATAAA
GCTCAGGGCA TCCAACAATA TTTTGATATG AATGTGGTCA AGCAGCTTTG GCAGCAACAT
CAAGCAGAAA AAGCCGATCA CAGCACGGTG TTATGGAGCA TGTTGATGTT TCAAATGTGG
TGGTTTCGTT ATATTCAATC GACTGAAATG ACAAAATCGC AATGA
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| Protein sequence | MCGIAGFTQF SGNMGNQQTL KKMGDSIYHR GPDAGREYID EYVGLAHRRL AIIDLSEAGT
QPMYSHDERY IIAFNGEIYN FQALRDDLVS EGYPFKTHTD TEVILALYAA HGEKMLSMLN
GMFAFALWDT TSKRLLIARD RVGKKPLYYL KTDTQFAFAS EIKALLTLPN VSREVRLDAV
HDFFAYQYVP DPKTIFTDIH KLPPAHFMWV SQDGIQIEQY WDVSFKQTSN QSQTELTKAL
YDLATEKTCS RMVSDVPLGA FLSGGIDSSG VVAMMALNSD KPVKTCSIGF DEKRFNETEF
AQIVADQYKT EHHEFTVHQN VKDNLEEIVG YFDEPFADPS LVPTYFVSQL ARSQVTVAIA
GDGGDEVFAG YEKYTTDALE NKLRERFPEA LRKKVFPKLA NVFAKSEHPL FRKAKSLLTS
LSLDPAMGFY VTNSMIDDRL WERLASSDTK AKLGAYHPSE VTLENYHKAD GKDHLSKILY
TDMKTYLPGG ILVKVDRMSM AHSLEVRAPL LDKDVIEFSA TLPSDLKYRD GEKKFILKEA
FKPVLPDDIL YRKKMGFSVP LATWLRCEIK ELTEDYLFNK AQGIQQYFDM NVVKQLWQQH
QAEKADHSTV LWSMLMFQMW WFRYIQSTEM TKSQ
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