Gene Patl_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1136 
Symbol 
ID4173185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1374577 
End bp1375284 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content47% 
IMG OID638054142 
Productphosphoglycerate mutase 
Protein accessionYP_660716 
Protein GI109897461 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCATG TCGCTGTGAA TAACAATACT GGCGATAGCC CTGCACTGAG CAGCCGTTCA 
GTGGGTAGCC ATCAACTTGA CCATGGCGCA GCAACCACGT TCAATTTGCT GCGCCATGGT 
CAAGTTGATG GCCCTAGCGC ACTTTATGGC AAGACCGACA TTCCCCTTAG TGAACAAGGT 
TTACACGCTA TGCAAGCGCA AATGCAAAAA ACGTCAAAAG TGGATGTCAT CATTTCATCC 
CCTCGGCTGC GTTGCCTGCA TTTTGCCAAG GCATTCGCTG AATTTTTATC CGTACCACTG 
GTGATTGAAG ACGACCTTCA AGAGTGTGAT TTTGGTTTGT ATGACGGTAT CCCCTTTGAT 
GATTTAAGCG AGCAATGGCT TGAGCTAAAT GCGTTTTGGC AAGAGCCTAT GCATAACACC 
TTACCAAACG CCGAATCCTT AGAACGTTTT CATCAACGGG TAGTAAATTG TTGGCAGCGT 
TTAACCACTA AGCACCAAGG GCAAAACTGC TTAGTGGTTA GCCATGGCGG CGTGATACGC 
CAAATTTTAG CTGATGTGTT ATCTGCAAAT TGGCAACAGG GTGATTGGTA CGCCAAGTTG 
CAAATTGGCT ATGCCAGCCT AACGCGTATC GCTATCGCAG AGTACGAGCA AGCGGTTCCT 
GTGGTGAACT TTATCGCCAA ACCAGCGTTT AACGAGAACG CACTATGA
 
Protein sequence
MNHVAVNNNT GDSPALSSRS VGSHQLDHGA ATTFNLLRHG QVDGPSALYG KTDIPLSEQG 
LHAMQAQMQK TSKVDVIISS PRLRCLHFAK AFAEFLSVPL VIEDDLQECD FGLYDGIPFD 
DLSEQWLELN AFWQEPMHNT LPNAESLERF HQRVVNCWQR LTTKHQGQNC LVVSHGGVIR 
QILADVLSAN WQQGDWYAKL QIGYASLTRI AIAEYEQAVP VVNFIAKPAF NENAL