Gene Patl_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1095 
Symbol 
ID4173624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1316024 
End bp1317169 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID638054101 
Productacyltransferase 3 
Protein accessionYP_660675 
Protein GI109897420 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAG CTGGCTTAGA AGGCTTAAGA GGAATAATGT GTGTATGGGT AGTTATCACC 
CATACCTTAA CGATCGCCGC ACTACCCATC TACAAGAATG AAGGTGTGGG TATGTTACTT
GCTAATGGCA CCTATGCAGT AGGTGTGTTT ATCCTGCTTA GCGGTTTTGT AATTGCTTTT
TTACTGGACA GTAAAAAAGA ACAATACGGC CTTTATATAG CTAGAAGAGC CCTGAGGCTC
TTTCCTGCTT ATTTGGTATG TTTACTACTC AGCATACTGA TTTTGGACAT GTCCATTGAA
TTTCTGAATC AGTTGATATT TGAACACCCG AAAACTGCAA ATCGCTTAGA GCTTTTTCAC
GATACCAAGG ATAACCTGAC AACCCATTCA CTGCTCCATC TTTTCATGTT GCATGGGATA
GTAACTTCTG AGTTTTTACC CTCGTCAGCT TACGCGATTA TGGGTCAAGC GTGGAGCCTA
ACGCTTGAGT GGCAGTTTTA TCTCATAGCA CCTTTATTGA TGTATTTTTT GAATCAGAAA
AATTGGTTTT TCGTAGTCGC GATATCAGTT TTACTGCTTA TTTTGCAGCG TGAACTAGCT
TGGGTAATGG GACATCGATC CTTTATCTTT GCTAATATAT CGCTGTTTAT TTCGGGGATA
TTGACGTTTA GATTTTTTAA ATCTTTTAGA GACGGAATAT ACTCGAAAAA AGAATACCTG
ATTAAATTTA GTATTTTAGT ACTCCTCACA ATTGTATTCC AAATCAAGAT TGGTAGTAAA
TTGGCTATGA TTCCACCGCT TATTTGGTGG ATAACCATTG TGTCAGAAAC TGTTATCACG
AAGAACGTAC TTCTGAATAT GGTGAAACGT ATTAATAATT GTCGACCAAT ATTATTCTTG
GGAAAAATAT CTTATTCAAT TTACTGTTTC CATATGATAT CGCTCTACTG TGTGGGTTGG
TTCTTCATGG TCGTTATGCC TATCAGCTCT CATGTGCTGT ACGCATCGTT AGTAATTGGC
TTATCATTCC CTATAACTAT TGGAGTCTCA TTTCTCATCT ACTCTTACGT AGAAAAATAT
TTCATTAAAG TGGGCAAGGG GCTTGGTGTG CTTTCAGCTG ATAAAGTTGT TTCAAAAACT
AATTGA
 
Protein sequence
MKLAGLEGLR GIMCVWVVIT HTLTIAALPI YKNEGVGMLL ANGTYAVGVF ILLSGFVIAF 
LLDSKKEQYG LYIARRALRL FPAYLVCLLL SILILDMSIE FLNQLIFEHP KTANRLELFH
DTKDNLTTHS LLHLFMLHGI VTSEFLPSSA YAIMGQAWSL TLEWQFYLIA PLLMYFLNQK
NWFFVVAISV LLLILQRELA WVMGHRSFIF ANISLFISGI LTFRFFKSFR DGIYSKKEYL
IKFSILVLLT IVFQIKIGSK LAMIPPLIWW ITIVSETVIT KNVLLNMVKR INNCRPILFL
GKISYSIYCF HMISLYCVGW FFMVVMPISS HVLYASLVIG LSFPITIGVS FLIYSYVEKY
FIKVGKGLGV LSADKVVSKT N