| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1089 |
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| Symbol | |
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| ID | 4172628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1308780 |
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| End bp | 1309871 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054095 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660669 |
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| Protein GI | 109897414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.250695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTA ACAATGTACT GTTTTTACAC AAGTGGTTTT CGTTATCTGG TGGGGTTGAA
CGCGTTCACC AAAACTTATC GAATGCGCTG GCTAATGAGG GTATTTCCTC AGAATTCTAC
GTATACGATA TAAAAGGCGA TAAAAAAGCC GGTTATGACA AACTGATCGA CACCAAGAAG
GCGACGCATC CGAATCAATC TGATAGTTTC TTCAAAAAGT TAAAGCACCT ATTTGCTCAT
ATTAAAGCTA ACGATATCGA TGTCATCATT GCCGCGACGG AAACGGCAAA TATTTTAGCC
GCATTTTGCG CGTTAAGATT TCCAAAATTA TCGGTGGTAT ATACCAGACA TTGCGCTTTC
GATGTGAGCG ATCAAAAGCT ATCACCCGCG AAGATAAAAT TGCTTTATAA TTTCTACTCG
TTGACGGGCG GGGCAATAGT GACCGTTTCT GGGTCACTTC AGCAGGAACT ACTTCGCAAC
ATTAAACTTG GCAGAAAGCA CGTCGAATTT ATTCCCAACG CTGTGGTCGA CCAACAAGTG
ATAGCGAAAT CTTTGAACAA TACCGACGCA TTTGAATCAA CCGATTACTT TTGTGCTGTA
GGGCGGCTTG TAGAGCAAAA AGGTTTTGAT ATGCTCATTC AAGCTTACGC GCAAGCCCGT
CAGGCGAATA ACAACCTACC AAAGTTGCTC ATCGTTGGCA TTGGTGAACT AGTAGATGAA
TTAACTCAAC TAGCAGAGTC ACTGAACATT AAAGAGTATG TTGAGTTCTA CGGCTTTACT
GAAAACCCAT ATTACATTAT ACGCAACGCC CAAGCGTTTA TTTTGTCATC TCGACATGAA
GGTATGCCCA CGGCGCTAGT AGAGGCGATG TATCTAAATA CACCGGTTAT CGCTTTTGAT
TGTCCTACTG GGCCTTCTGA GCTAATCGAA AACGGTGTAA ATGGCTTCTT GGTTGAAACT
AACAATGTTG AAAAGTTGGC TGACGCGATA GGGCGTTATA AACAGCTCAT TGGTAAAGAT
ATTGCTGATA GCGTGAGCGC GTTTGAGTAC CAAAGTGTCG CACGTCGTTA CATCAAAGAA
TTCAGTAGGT AA
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| Protein sequence | MSRNNVLFLH KWFSLSGGVE RVHQNLSNAL ANEGISSEFY VYDIKGDKKA GYDKLIDTKK
ATHPNQSDSF FKKLKHLFAH IKANDIDVII AATETANILA AFCALRFPKL SVVYTRHCAF
DVSDQKLSPA KIKLLYNFYS LTGGAIVTVS GSLQQELLRN IKLGRKHVEF IPNAVVDQQV
IAKSLNNTDA FESTDYFCAV GRLVEQKGFD MLIQAYAQAR QANNNLPKLL IVGIGELVDE
LTQLAESLNI KEYVEFYGFT ENPYYIIRNA QAFILSSRHE GMPTALVEAM YLNTPVIAFD
CPTGPSELIE NGVNGFLVET NNVEKLADAI GRYKQLIGKD IADSVSAFEY QSVARRYIKE
FSR
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