| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1072 |
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| Symbol | |
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| ID | 4172611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1286124 |
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| End bp | 1286660 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054078 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_660652 |
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| Protein GI | 109897397 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.875269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA AATCCGTTTT TTGGCTATGG CTTATGCTTT TTAGCACTGC TGCCTGGTCT
TTAGATGCCA GTTTAAGTCA ATATAAGCTC GGCTCTGGTG ATGTGATTAA AATCACCGTT
TTCGGTCAAC AGGATTTATC GTTGACCACT AAGTTGCCTA ATCACGGAGT GATTAACTAC
CCATTTTTAG GTGATTTAAG AGTGATTGGA TTGACGGGGA CTGAGCTAGA GGCAAAGTTA
TATTCGGGAC TGAAGGGTGA TTATTTGGTT GAGCCTTCTG TGTCGGTAAC CGTTATTGAA
TATCGCCCTT TCTTTATCGA CGGTGAAGTT AAGCGACCAG GTGGTTATCC GTATCAACCC
GGACTGTCAG TCAATAAAGC CGCTGCGTTA GCAGGTGGTT ACACTGAAAG GGCGTCTAAA
ACCAAAATAT TCATCCGCCG AGACAATGAA TCAGGAGAAT CGGAGCAATT AAATGCAGAT
TCGAATGATG TGGTTTTACC CGGTGATATA GTTACCGTTC AGCAAAGCTT CTTTTAA
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| Protein sequence | MKAKSVFWLW LMLFSTAAWS LDASLSQYKL GSGDVIKITV FGQQDLSLTT KLPNHGVINY
PFLGDLRVIG LTGTELEAKL YSGLKGDYLV EPSVSVTVIE YRPFFIDGEV KRPGGYPYQP
GLSVNKAAAL AGGYTERASK TKIFIRRDNE SGESEQLNAD SNDVVLPGDI VTVQQSFF
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