Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1067 |
Symbol | |
ID | 4172853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1277044 |
End bp | 1278651 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054073 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_660647 |
Protein GI | 109897392 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGACG CAAAATTAAA AGGCCAATTG GCGACTTATT TAGAAAATTT AACTTCACCC GTGGAGTTAC GCATTGCTGT TGATGAGCAA CATCAAGCTA AGAAATCCGC AGAACTCACA GATTTGGCGA ATGAAATAGC TGCGTTATCG CCGTTGGTCA GCGTTGTGGC GCAAAGTAAA AGCGACATTC GAAAACCGTC GATGGAAGTG GTTTCCATAA CAAATAGCAC CTCAATTACT TTTGCTGGTG TACCTATGGG CCATGAATTC ACTTCATTAA TACTCGCGTT ATTAAACAGT GGCGGCCACC CGGTGAAAAT CAGCGAGCAG CAAGTAGCTG AAATAAAGTC ACTTTCTGGT TCATACCAAT TTGAGACATA CGTTTCGTTG AGCTGTCAGA CATGCCCAGG GGTAGTGCAA GCCTTAAACG TGTTGTCTGT TATCAATCCA AATATTACTA ATACCATGAT TGATGGTTCA CTGTTTCAAG AAGAAGTGAC ACAGCGCAAT ATCATGTCAG TACCAAGCGT GTATTTAAAT GGCGAGCTGT TTACCCAAGG GGCAGTGACC ATAGAGAAAA TTTTAAGCAA AATTGACCCT CAGGCAGATG CCAAGCAAGC CCAGTCACTC AATGACAAAG CACCTTATGA CATGCTCATT GTAGGCGGCG GTCCAGCGGG TGCAGCCGCT GCGATTTACG CAGCAAGAAA AGGCATTCGT ACTGGTATTG TGGCCGAAAA GTTTGGTGGG CAAGTGACTG ACACCATGGC TATCGAAAAC TTTATTTCGG TTAAAGCGAC TGACGGCCCT AAACTTGTGT CAGGCCTTGA GCAACACGTG AAAGATTATG ATGTGGACAT CATGACGAAT AATAAAGCCG TGAAGTTAAC AAAAGACGGC TTGCTCAATA TCGAGCTTGA GAATGGCGCA TTGTTATCCA GTAAAACAGT GATGTTAGCC ACCGGAGCAA GATGGCGTGA AATGAACGTG CCAGGCGAGC AACAATACCG CGGGGCAGGC GTTGCTTATT GCCCACACTG TGATGGGCCG CTATTTAAAG GCAAACGCGT CGCGGTGATT GGTGGCGGTA ATTCAGGTAT CGAAGCGGCT CTTGATTTAG CCAATATCGT TGAACATGTC ACCGTACTCG AATTTGATAG CAAGTTGCGT GCTGATGAAG TACTTCAGCG CAAAGCAAAA GCGGCTAACA ATATCGACAT TATCTTAAAT GCTATGACGA CAGAAGTGCA AGGCGATGGC AAACGTGTTA CCGGTCTAGC CTATCAAGAC CGAGCCAGCC AAGAAAGTCA TCAAGTCGAA TTGGCTGGCA TTTTTGTGCA AATTGGTTTG GTGCCGAACA CCGAATGGTT AAAAGGTGAT ATTGCCTTAA CTGCTCGAGG TGAAATAGAA GTAGGCCAAC GTGGTGAAAC CTCGATTGAA GGTGTATTTG CCGCAGGTGA TGTAACGACT TCGCCTTACA AGCAAATTAT CATCGCCATG GGTGATGGAG CAAATGCTGC ACTCGGTGCG TTTGATTACT TACTTAGAGC GCCGGCTGAC GAAAATACCC CGTCAGTTGA AAGTAACATC GGTGAAAAGG CAGCTTGA
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Protein sequence | MLDAKLKGQL ATYLENLTSP VELRIAVDEQ HQAKKSAELT DLANEIAALS PLVSVVAQSK SDIRKPSMEV VSITNSTSIT FAGVPMGHEF TSLILALLNS GGHPVKISEQ QVAEIKSLSG SYQFETYVSL SCQTCPGVVQ ALNVLSVINP NITNTMIDGS LFQEEVTQRN IMSVPSVYLN GELFTQGAVT IEKILSKIDP QADAKQAQSL NDKAPYDMLI VGGGPAGAAA AIYAARKGIR TGIVAEKFGG QVTDTMAIEN FISVKATDGP KLVSGLEQHV KDYDVDIMTN NKAVKLTKDG LLNIELENGA LLSSKTVMLA TGARWREMNV PGEQQYRGAG VAYCPHCDGP LFKGKRVAVI GGGNSGIEAA LDLANIVEHV TVLEFDSKLR ADEVLQRKAK AANNIDIILN AMTTEVQGDG KRVTGLAYQD RASQESHQVE LAGIFVQIGL VPNTEWLKGD IALTARGEIE VGQRGETSIE GVFAAGDVTT SPYKQIIIAM GDGANAALGA FDYLLRAPAD ENTPSVESNI GEKAA
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