| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1058 |
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| Symbol | |
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| ID | 4172844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1265921 |
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| End bp | 1267972 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054064 |
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| Product | iron permease FTR1 |
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| Protein accession | YP_660638 |
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| Protein GI | 109897383 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
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| TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0352795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTAT ACGCATTCAC ACACTTAAAC GTTAAGGTTT TAGTTTTGTA CTCTTCTGCT
ATTTGTTTTA AACGCTTTTT GGTTTCATTC GTTCATCTTA TGCAAAGTCG TCGTCAACTC
TTTGCTGAGC TGGCGTTCAG TTTCTGCATC ATGCTGAGCC TTACTCAATC GGCGCCGAGT
TTAGCTCAAT CAGCTTCTCA ACTAGATGCG GTTAAAGAGA GTCGTCAGAT TTTACAAATG
GCGGAATACA TAGGTGTTGA TTACTCAGAA GCCGTGGTCG ATGGTGAAGT ATCAAGCGAA
GACGAATTTG CTGAAATGCA ACAATTCGCC AAGCTAATTT TGCAAAAGGC GGAGGCATTA
CAAACTGCCG CGCTAAGTGA CTTTGATTTA CAGAAAACGT CGGTCATCGC CAATGCCCAA
GCACTGCAGC AGGCTATTTT AGCTAAGTCA GCAATGGGGA AAATTCAAAG CCTGACATTA
CAAATTCGCC AAGAGTTATT AGCCATGTCG CCCGCGCTAA AATTGCCAGC GCAACTGTTG
CCTCAAGCAG AAATAGATAA ACTCTTTGTT GATAACTGCT CTGCATGCCA TGGCCCAGCC
GGTCAAGGCG ACGGTCCACT AGCGAAGTCG TTTAGCCCTC AGCCAACAGA CTTTACTGAA
AAAGAGCGCG CACAAAATCG TTCTTTGTTG GGGCTTTACG ACGCTATCAG CGCAGGGCTG
GACGATACCG CAATGCGCGC GTTTACCGAG CTCAACGATC AGCAGCGTTG GTCTTTAGCG
TTTTATGCTG GCAGTTTGGC CTTTAAAGGT GCGGCGGGAA ATGATTTAGA TGTTAAACCG
ACGCTGCCCC TGCAACGCTG GATAAACAAT AATCCAGTAC AAATTGCAGC GCAAAATGAT
GCGATTAGCC AGGTGCAAGT TGAGCAGTGG CGCGCCTCGC CAGAGATATT TTTTGGACAA
GCCAATACGC CTATCGCCAC AGCAAAAAAC AACCTGATCG CCGCTGTCGA TGCTTACAAC
GAAGGCAATT TTGCGCAAGC ACAAACACTC GCCGTCAGTG CCTATTTAGA TGGTTTTGAA
CTGATCGAAA ATAACCTCGA CGCCAGAGAT AGTGGTTTAC GAAAATCGGT AGAAAAGCAG
TTGTTGAATT TCCGTAATGT GCTGAGCTCA CCCAATAATG AGCAACAGGT AAGCGCTGAA
TCACAACAAA TATTGCAGCA GCTTGAACAA GTCGATAACA CACTGAACTC AGCGACGTTA
TCGAACAACG CCATGTTTTC GGCTTCGTTG ATCATTTTGT TGCGTGAAGG GTTAGAAGCA
CTGCTTATCG TGTTAGCGCT CATCACCGTA CTGATAAAAA CCCAGCGCCA AGACGCCATC
CGCTACGTAC ATTTTGGCTG GGCATCAGCA CTTATTGCTG GTGGCGTCAC TTGGTGGGCG
GCTGAAAACC TGATCACGAT CAGTGGCGCA TCAAGAGAAC TCATGGAAGG CGGCGCGGCC
TTATTAGCCG CCGGCATTTT GTTTTACGTC GGTTATTGGA TGCATAGCAA AACCCAAGCA
TCAGTGTGGC AGAAATACAT CAATGACAAC GTCGAACGTC ATTTAAGCAC CGGCACCTTA
TGGGGCTTAA CTGGGTTGGC GTTTATTTCA GTTTATCGAG AGGTCTTCGA AACAATTTTG
TTTTATCAGT CACTGTTAAC TCAATCGGTA GGGGATGGCA GCCAAGTAAG CTTTGTGTGG
TACGGACTCG TCGCTGCGGT TGCCATACTC GCACTGATCA CCTGGCTGAT GCTTAAGTAC
ACCGTCAAGT TACCTATCGC CCGCTTTTTC TCTATGAGCG CTTACTTTAT GTTGATATTG
GCCTTTATTT TGGCGGGCAA GGGGATTTCT GCACTGCAAG AAGCTGCGAT CATTGGCATC
AATGCATTTC CACTAGATGT TTCGATAAGC TGGTTGGGTA TTTCTGCCAC ATGGCAGGGG
GTACTAGTGC AAGGTGTCAT ACTTGCGTTG TTCATCGTCA TGATGACGCG CAAAGATACA
GCGTCAGCAT AA
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| Protein sequence | MSLYAFTHLN VKVLVLYSSA ICFKRFLVSF VHLMQSRRQL FAELAFSFCI MLSLTQSAPS
LAQSASQLDA VKESRQILQM AEYIGVDYSE AVVDGEVSSE DEFAEMQQFA KLILQKAEAL
QTAALSDFDL QKTSVIANAQ ALQQAILAKS AMGKIQSLTL QIRQELLAMS PALKLPAQLL
PQAEIDKLFV DNCSACHGPA GQGDGPLAKS FSPQPTDFTE KERAQNRSLL GLYDAISAGL
DDTAMRAFTE LNDQQRWSLA FYAGSLAFKG AAGNDLDVKP TLPLQRWINN NPVQIAAQND
AISQVQVEQW RASPEIFFGQ ANTPIATAKN NLIAAVDAYN EGNFAQAQTL AVSAYLDGFE
LIENNLDARD SGLRKSVEKQ LLNFRNVLSS PNNEQQVSAE SQQILQQLEQ VDNTLNSATL
SNNAMFSASL IILLREGLEA LLIVLALITV LIKTQRQDAI RYVHFGWASA LIAGGVTWWA
AENLITISGA SRELMEGGAA LLAAGILFYV GYWMHSKTQA SVWQKYINDN VERHLSTGTL
WGLTGLAFIS VYREVFETIL FYQSLLTQSV GDGSQVSFVW YGLVAAVAIL ALITWLMLKY
TVKLPIARFF SMSAYFMLIL AFILAGKGIS ALQEAAIIGI NAFPLDVSIS WLGISATWQG
VLVQGVILAL FIVMMTRKDT ASA
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