| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1054 |
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| Symbol | |
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| ID | 4172840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1259106 |
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| End bp | 1260416 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054060 |
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| Product | histidine kinase |
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| Protein accession | YP_660634 |
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| Protein GI | 109897379 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.814283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTACC CTTTCTCATG GCTTAGAAGC CTAGGCCGTT TAGCGGCCTA CTTTTTGGTG
GTTATCTTAC TTGGCTGGTA TTTCTCAGAG CCAAGCTTAG CAGTCGCTAT TGGTGCGTTA
CTGCTCTTGG CGAGCCATTA CTGGAATATA TATCGACTAA ACCATTGGTT GTGGCAGAGT
AAAAAAATTA CGCCTCCCAG AGTCAATGGC GTGTGGGAGC ATATATACGA CGGTATCTAC
ACACTGCAAA GGCGAAACCG CGCTAAACGC AAAGAACTAG GGTTATTAGT TAAACGCTTC
CGAGAAGGGT CCGAAGCGCT GCCTGATGCC GCCGTCGTGG TGGATGCAAA CGCAGCGATT
ATTTGGTGTA ACCGATTAGC TAGAATTGAG TTAGGGCTAC GCTGGCCTGA CGATGCAGGT
CGTCGAATTT ACAATTTGGT GCGCCATCCA CAATTTGTCG AGTTTTATCA CAACAAAGAT
TATGAAAAGC CGATAGAAGT GCCGTCTCCG GTAAACGATC AGCGTATTCT TGAATATCGC
ATTATGCCTT ACGGCGATGA ACATTTACTG CTTTTGATTA GGGACGTTAC CAAGCTCACC
CAAATAGAGA AAATGCGCAA AGATTTTGTC GCTAATGTGT CTCACGAGCT ACGAACACCT
TTAACGGTGA TCAATGGTTA TTTAGAGACT CTGCCAGGGG CGACTAATAT CCCAGAGGCC
TTTTTGGCAA AAGCGTTTGA AGAAATGCGC TCTCAGTCCA CGCGCATGCA GTGCTTGATC
GAGGAGCTAT TAGTGCTATC TAGAATCGAA GCCAGTAGTG AGCGCTCTAC GGAAAACATT
GTCGATGTGC CGCAAATTCT CAATACGATC AAGATTGAAG CCGATACCCT CAATGGCGCA
AAGCAGCATA CGATCACAAT GGACGTTGAC CAAGGTCTGA AAGTCTACGG TGTCGAAACT
GAATTACGCA GTGCGTTTTC CAATTTATTA TTTAATGCCA TTCACTACAC CCAAGAAGGC
GGCAAAATTC ACGTGCAATG GTCGTTAGTG GATGGCCAAG CAACGTATTT GGTCACTGAC
AACGGTTATG GGATTGAGGC CAAACACTTA GGTCGCCTAA CTGAGCGATT CTATCGAGTC
GATAAAGCGC GCTCGCGTAA AACAGGTGGC TCGGGGTTAG GTTTATCTAT TGTTAAACAT
GTGCTCAATC ATCATAACTC TCGCTTACGT ATCAAAAGCA AAGTCGGAGA GGGCAGTGAG
TTCTCATTTG CGTTTTCTCA CGAGTTATCG GTGAAACAGT CTACGTCTTA G
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| Protein sequence | MYYPFSWLRS LGRLAAYFLV VILLGWYFSE PSLAVAIGAL LLLASHYWNI YRLNHWLWQS
KKITPPRVNG VWEHIYDGIY TLQRRNRAKR KELGLLVKRF REGSEALPDA AVVVDANAAI
IWCNRLARIE LGLRWPDDAG RRIYNLVRHP QFVEFYHNKD YEKPIEVPSP VNDQRILEYR
IMPYGDEHLL LLIRDVTKLT QIEKMRKDFV ANVSHELRTP LTVINGYLET LPGATNIPEA
FLAKAFEEMR SQSTRMQCLI EELLVLSRIE ASSERSTENI VDVPQILNTI KIEADTLNGA
KQHTITMDVD QGLKVYGVET ELRSAFSNLL FNAIHYTQEG GKIHVQWSLV DGQATYLVTD
NGYGIEAKHL GRLTERFYRV DKARSRKTGG SGLGLSIVKH VLNHHNSRLR IKSKVGEGSE
FSFAFSHELS VKQSTS
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