| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1030 |
|---|
| Symbol | |
|---|
| ID | 4173309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1224455 |
|---|
| End bp | 1225174 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638054036 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| Protein accession | YP_660610 |
|---|
| Protein GI | 109897355 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGCTT TGCTTCGGAT TATCAGTATT TTCTTTTACT TTCTTTTTAT CAATTTGTTG
CTGGTGATAA TTTGTATTCT TCGCCCTTTT CACCGAGATA ATGTGCATGT AGCGGGCAAG
TTGTATAGTT CAACGTGCAA ATTATTAGGG CTCAAGTTGG AGGTTAGAAT CGCCCCTGAA
GCGTTAAACG GTGGCCCTTT TATACTTATC GCCAATCATC AGAATAGTTA TGATATTTTT
ACTATTTGCG CGGCTGCATT GAAGGGAACA GTGACAGTAG GTAAAAAAAG CCTGAAGTGG
ATCCCGTTAT TTGGCCAAGT ATATTGGTTG TCAGGCAATA TTATGATTGA TCGTAAAAAC
TCTGGGCGAG CTATGGATAC GTTGAAGGGG ACAGTGAAAA AGATGCATAA ACGCAAACTT
TCTGTGTGGT TCTTCCCCGA AGGTACACGT AGTTATGGCC GTGGACTATT GCCTTTTAAA
ACAGGTGCGT TTCGTATTGC CCAGCTCGCT AAACGGCCAG TGGTCATAGT CGCGGCGAGT
AATCTGCATA ATAAAATTAA ACTAAACAGA TGGGACAATG GCACTGTAAT CATTGATGTA
GGTAAACCGC AAGAACTCGA CAGTAGCCGC TCTACTAAAG AATGGACGGC ATATTTTCAT
ACTGCCATGG CGCAAAAAAT AGCAGAATTA GACAGTGAAG TTGCCGCTGG CAACCGCTAA
|
|---|
| Protein sequence | MLALLRIISI FFYFLFINLL LVIICILRPF HRDNVHVAGK LYSSTCKLLG LKLEVRIAPE
ALNGGPFILI ANHQNSYDIF TICAAALKGT VTVGKKSLKW IPLFGQVYWL SGNIMIDRKN
SGRAMDTLKG TVKKMHKRKL SVWFFPEGTR SYGRGLLPFK TGAFRIAQLA KRPVVIVAAS
NLHNKIKLNR WDNGTVIIDV GKPQELDSSR STKEWTAYFH TAMAQKIAEL DSEVAAGNR
|
|---|
| |