Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1021 |
Symbol | |
ID | 4173300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1211975 |
End bp | 1213675 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638054027 |
Product | urocanate hydratase |
Protein accession | YP_660601 |
Protein GI | 109897346 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGTC TCGATAGAAA TCGCACCATC CGAGCAGCAA GAGGGAGCAC TTTGACAGCT AAGAGTTGGC AGACAGAAGC GGCCCTACGA ATGTTAATGA ATAACCTTGA TGCCGAAGTG GCGGAACATC CTCATGCGCT TGTTGTGTAC GGCGGCATCG GACGAGCCGC GAGGGATTGG TCTTGCTATG ACAAAATCGT TGAAGTGCTA ACCCGTATGA ACAATGACGA AACGCTATTA GTGCAAAGTG GAAAGCCTGT GGGCGTTTTC ACAACCCATG AGAATGCGCC TAGGGTACTG ATAGCGAACT CAAATCTCGT TCCTCACTGG GCTAACTGGG AGCACTTCAA CGAGCTCGAT AAAAAAGGCT TGATGATGTA TGGGCAAATG ACGGCTGGCT CTTGGATCTA TATTGGCTCT CAGGGCATAG TACAAGGCAC ATACGAAACC TTCGTCAGCG TGGCCAAAGC ACACTTTGAG GGCAACTCAC AGGGACGATG GATATTAACC GCTGGACTCG GGGGAATGGG GGGCGCTCAA CCACTGGCCG CTACCATGGC CGGGTTCTCA ATGTTGGCTG TAGAGGTGGA TGAAAGTCGG ATCGATTTTC GAATTAAAAC AGGTTATTTA GATGAAAAAG CAGCTTCGCT AAGCCAAGCG ATAGCGCGAA TTGATGCGGC AAGAGCCGCT AATAAACCAA TATCTATCGG CTTGGTTGGT AATGCCGCGG ACGTCTTTCC CGACATACTC GCCAAGGGCA TTACCCCCGA CGTGGTTACG GATCAAACGA GTGCCCACGA CCCTTTGAAC GGATATTTAC CTAAGGGTTG GACGTTGGCT CAAGCAGCCC AAACGCGCGC CGTAAACGAA GCGAGCGTGG TAAAAGCAGC GAAACAGTCT ATGGCAATAC ATGTTGAAGC CATGCTTGGT TTGCAAGCTA AAGGCGCTGC AACACTAGAC TATGGTAATA ATATTCGTCA GATGGCGCTG GATGAAGGAG TACTAAACGC CTTTGATTTT CCAGGCTTTG TGCCTGCTTA CATTCGCCCC TTATTCTGCC AAGGCATAGG GCCATTTCGC TGGGTGGCCT TATCAGGTGA CCCACAAGAC ATCTACAAAA CTGATGCTAA GGTAAAAGAG CTTATTCCCG ACAACGAACA TTTGCATCAT TGGCTAGATA TGGCCAGACA GCGTATTCAA TTTCAAGGTT TACCAGCGCG TATTTGTTGG GTTGGCTTGG GGGAAAGGCA AAAATTGGGA TTGGCTTTTA ATGAAATGGT GCGCACCGGC GAATTGACCG CTCCTATTGT TATTGGGCGA GATCATTTGG ATTCAGGCTC AGTGGCATCA CCGAACCGCG AGACTGAAGG TATGCTTGAT GGTTCTGATG CTGTTTCTGA TTGGCCTTTA CTAAACGCCA TGTTGAATAC GGCTTCGGGC GCGACATGGG TGAGCTTGCA TCACGGTGGT GGTGTTGGGA TGGGGTTCAG CCAGCACTCG GGCATGGTGA TTGTCTGTGA CGGTAGCGAA GAAGCTGATA AGCGCATAGC TCGCGTTTTA CATAATGACC CGGCCACCGG CGTTATGCGC CACGCTGACG CAGGCTACGA AATCGCTAAG CAGTGCGCTA AACGTCATAA GCTCGATTTA CCCATGCAAA GCGATCGAGT GACTAGCATA AACCCACAGG GGGAGGTGTA A
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Protein sequence | MQRLDRNRTI RAARGSTLTA KSWQTEAALR MLMNNLDAEV AEHPHALVVY GGIGRAARDW SCYDKIVEVL TRMNNDETLL VQSGKPVGVF TTHENAPRVL IANSNLVPHW ANWEHFNELD KKGLMMYGQM TAGSWIYIGS QGIVQGTYET FVSVAKAHFE GNSQGRWILT AGLGGMGGAQ PLAATMAGFS MLAVEVDESR IDFRIKTGYL DEKAASLSQA IARIDAARAA NKPISIGLVG NAADVFPDIL AKGITPDVVT DQTSAHDPLN GYLPKGWTLA QAAQTRAVNE ASVVKAAKQS MAIHVEAMLG LQAKGAATLD YGNNIRQMAL DEGVLNAFDF PGFVPAYIRP LFCQGIGPFR WVALSGDPQD IYKTDAKVKE LIPDNEHLHH WLDMARQRIQ FQGLPARICW VGLGERQKLG LAFNEMVRTG ELTAPIVIGR DHLDSGSVAS PNRETEGMLD GSDAVSDWPL LNAMLNTASG ATWVSLHHGG GVGMGFSQHS GMVIVCDGSE EADKRIARVL HNDPATGVMR HADAGYEIAK QCAKRHKLDL PMQSDRVTSI NPQGEV
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