| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1015 |
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| Symbol | rplQ |
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| ID | 4171991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1200173 |
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| End bp | 1200574 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054016 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_660595 |
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| Protein GI | 109897340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000218208 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAGTTG AATCGTAATA GTAGTCACCG TCAAGCGATG
TTTCGCAATA TGGCTGGCTC ATTGGTGAAG AGTGAGTTGA TTAAAACAAC TCTTCCTAAA
GCGAAAGAAC TACGTCGCGT AATTGAACCT CTTATCACAC TTGCTAAGCA AGACAGTGTT
GCAAATCGCC GTTTAGCGTT TGCACGTACT GGTGATAAAG AAGTTGTAGG TAAGTTATTT
AATGAACTTG GCCCTCGCTA TGAAGAGCGT CCTGGTGGAT ATATTCGCAT TTTAAAATGC
GGTTTCCGTA CCGGCGATAA TGCTCCAATG GCATATGTAG AATTAGTAGA CCGCCCAGAA
GTGGAAGAAG TCGTAGAGAC TGAAGACGCA GCTGCGGAAT AA
|
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| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMAGSLVK SELIKTTLPK AKELRRVIEP LITLAKQDSV
ANRRLAFART GDKEVVGKLF NELGPRYEER PGGYIRILKC GFRTGDNAPM AYVELVDRPE
VEEVVETEDA AAE
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