Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0995 |
Symbol | |
ID | 4173497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1187513 |
End bp | 1188253 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638053996 |
Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
Protein accession | YP_660575 |
Protein GI | 109897320 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAC ATGAGTGGTT GTATGGTATT CATGCATTAG AAGCAGTGAT AGAGCGTGAG CCAGAGCGTT TGATTGAGTT GTTTGTCCTT AAAGGTCGTG ACGACAAACC GATTAATTCA ATCATCAATC ATGCGCGTAA GTTTGGTATT GCGGTGCAAT TTTGCCAGCG CAAAACCTTA GACGATAAAG TCAATGGTGA ACAGCACCAA GGTGTTGTAG CGAAAGCGAA GCCCGGTAAA CAGTTTAACG AAAATGATTT AGACGAAATC ATTAAAAAAA GCGCCACGCC TTTTTTGTTA ATACTCGATG GTGTAACTGA TCCTCATAAT TTAGGTGCGT GTTTGCGTAC CGCCGATGCA GCAGGTATTG ACGCTATTGT GGTGCCCAAA GACAACTCGG TAGCATTAAC GCCAGTGGTG AGGAAAGTCG CTTGCGGTGC AGCTGATTTG ATCCCCCTTA TACAGGTGAC TAACCTGGCA CGTACTTTAC GAGAGATTAA AGATGCAGGC GTATGGGTGG TGGGTACTGC AGGTGAAGCA ACCCAGAGTA TATACGATTG TAAGATGCAA GGACCGATAG CGCTGGTGAT GGGCGCCGAA GGCAAAGGAA TGCGCAGGCT GACCCGAGAA CATTGCGACG AGCTAATAAA GCTGCCCATG GCAGGTTCGG TTTCTAGCTT GAATGTATCG GTGGCGACCG GTATTTGCTT GTATGAAATT GTACGTCAGC GCACTAGCTA G
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Protein sequence | MAQHEWLYGI HALEAVIERE PERLIELFVL KGRDDKPINS IINHARKFGI AVQFCQRKTL DDKVNGEQHQ GVVAKAKPGK QFNENDLDEI IKKSATPFLL ILDGVTDPHN LGACLRTADA AGIDAIVVPK DNSVALTPVV RKVACGAADL IPLIQVTNLA RTLREIKDAG VWVVGTAGEA TQSIYDCKMQ GPIALVMGAE GKGMRRLTRE HCDELIKLPM AGSVSSLNVS VATGICLYEI VRQRTS
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