| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0984 |
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| Symbol | |
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| ID | 4173486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1176149 |
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| End bp | 1177225 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053985 |
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| Product | kelch repeat-containing protein |
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| Protein accession | YP_660564 |
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| Protein GI | 109897309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.998088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAT CGGCAAGTGC AATTGGGGGA CAAAATGCTA ACGCTGAATC AAAGATAAAG
GGACGCTACC CAGCAATGCC TGAACCAGTT ACCAACAATG CGGTGGTCAA AGTCGATACT
GAAAATGGTC ATTTTTTGTT ATCTTTCATG GGGCTAGGAG CTGGTAAAAC GCATGACGAT
GTTCACAACA AAGTGTGGGC CCTTGAACTT GCAGGTGAGT CATTTACGCC AAGCAAAGCT
TGGCAACAAA AATCACCGGT GCCGTCGAGT TTACCCCAGT CTGGTCGCTT AGCCAGTATT
GCCGTTGGTG TAGGCGATAT GGCACTTTTG TTTGGTGGTT ACACCGTTGA TGCTGCGCAT
AATGAAGTGT CAAGCCCAGA CAACTTTCGC TATGACGTTG TTACGGATAC CTACTACCCC
ATAGCTCAGA CGCCAGTGCC CGTGGACGAT GCAGTCGCAC TCGTTTTTCA GCAACGTTAC
GTATATCTGA TTAGCGGTTG GCATAATGAC GGTAACGTCA ATTTAGTCCA AATTTACGAT
GTGAAAACAG ATTCATGGCA TCAAGGTTCG CCTTTTTTAG GTAATCCCGT TTTCGGTCAT
GCAGGTGCGA TTGTGGGGGA AAATATTATG CTTTGTGATG GCGTTAAGGT GGATGCTCAA
CCAGATAAAC GGCGTACGTT TTCCGCAGAA CCAGCTTGCT ACCACGGAAC GATTGACAAG
AGTGATATCA AAAAAATTGA TTGGCGCACA GTAGCGCACC CTACATCGAG TGCACGTTAT
CGTATGGCTG CAACCGGTAA TGTTGCCAGT AATTCAGCCA TCTTCGTGGG CGGTTCAGAT
AACCCATACA ATTATAACGG CACGGGTTAC GATGGTGAGC CATCAAGTCC GAGCAATGAG
GTGTGGCGCT ACGACTTTAC TCAGTCGAGT TGGAATGTCT CCCACACGGA CTCGCCTACT
ATGGATCACC GGGGCTTATT GGCCGTGGGC ATAGGGGAAA ATAAGCATTT TGTCACGCTA
GGTGGAATGA TAGAGCAGCA AAAAGTATCA AACGCTGTAC ATCGCATCGA TTTATAG
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| Protein sequence | MILSASAIGG QNANAESKIK GRYPAMPEPV TNNAVVKVDT ENGHFLLSFM GLGAGKTHDD
VHNKVWALEL AGESFTPSKA WQQKSPVPSS LPQSGRLASI AVGVGDMALL FGGYTVDAAH
NEVSSPDNFR YDVVTDTYYP IAQTPVPVDD AVALVFQQRY VYLISGWHND GNVNLVQIYD
VKTDSWHQGS PFLGNPVFGH AGAIVGENIM LCDGVKVDAQ PDKRRTFSAE PACYHGTIDK
SDIKKIDWRT VAHPTSSARY RMAATGNVAS NSAIFVGGSD NPYNYNGTGY DGEPSSPSNE
VWRYDFTQSS WNVSHTDSPT MDHRGLLAVG IGENKHFVTL GGMIEQQKVS NAVHRIDL
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