| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0969 |
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| Symbol | |
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| ID | 4173818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1160140 |
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| End bp | 1160994 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053970 |
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| Product | DNA-binding transcriptional regulator HexR |
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| Protein accession | YP_660549 |
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| Protein GI | 109897294 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC TTGAAAAAAT AACTCAGCAT AAATTAGCGT TCAGCAAGTC AGAACGTAAG
GTCGCCGAAG TCATTTTGGC CAACCCTCAA GTCGCTATCC ATAGCAGCAT CGCCACCTTG
GCTAAGATGT CTGATGTCAG CGAGCCCACT GTTAATCGTT TTTGCAGACG CTTGGATACC
AAGGGGTATC CTGATTTTAA ATTACACCTG GCCCAAAGCC TCGCGAATGG CACCCCTTAC
GTTAATCGAC ACGTTGAAGA AGATGATGGC CCAGAGGAAT ACACCAAAAA GATTTTCGAA
TCGACCATGG CCTCACTCGA GGTTGCCCGC CAATCGGTTG ATATCAATAC GATCAACAGA
GTGGTAGATT TGTTGACACA GGCGCAAAAA ATTTCCTTCT TTGGCCTTGG CGCCTCAGCG
TCGGTCGCTC ATGATGCCCT CAACAAGTTC TTTCGTTTCA ATGTTCCGGT TGTCTATTTT
GAAGATATTT TAATGCAGCG TATGAGCTGT ATGAACTCAT CTGAAGACGA TGTTGTTGTG
CTTATATCTC ACACTGGTCG CACAAAAAGC TTAGTGGAAG TCGCACAAAT TGCCCGCAGT
AATGATGCTA CCGTGGTAGG CATTACCTCG CAAAATAGTC CCTTGGCGAA AGAGTGTAAT
TTAGTTTTGT CATTAGAAGT GCCTGAAGAT ACAGACATGT ATATGCCTAT GGCATCACGT
ATTGCTCAGC TAACGTTAAT CGATATATTA GCGACAGGCT TTACTTTACG AAGAGGTACT
AAATTCCGCG AAAACTTGAA ACGAGTTAAA GATACCTTGC GAGGCTCTCG TTACGATAAG
CGGAATGAAC AGTAG
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| Protein sequence | MNILEKITQH KLAFSKSERK VAEVILANPQ VAIHSSIATL AKMSDVSEPT VNRFCRRLDT
KGYPDFKLHL AQSLANGTPY VNRHVEEDDG PEEYTKKIFE STMASLEVAR QSVDINTINR
VVDLLTQAQK ISFFGLGASA SVAHDALNKF FRFNVPVVYF EDILMQRMSC MNSSEDDVVV
LISHTGRTKS LVEVAQIARS NDATVVGITS QNSPLAKECN LVLSLEVPED TDMYMPMASR
IAQLTLIDIL ATGFTLRRGT KFRENLKRVK DTLRGSRYDK RNEQ
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