| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0949 |
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| Symbol | |
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| ID | 4173126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1134513 |
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| End bp | 1135670 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053950 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_660529 |
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| Protein GI | 109897274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03207] cyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0416018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTG ATTTAAGCGA AGATCAGCAA GCGTTTGCGG ATACCGCTCG TCAATTTGCA
GAGCAAGCCC TAGCCCCTAA TGCAGCTAAG TGGGACAAAG AGCACCATTT CCCGAAAGAC
GTTATTCAAC AAGCAGGGGA GTTAGGTTTT TGCGGCCTAT ACACCAGTGA AGAAGACGGT
GGTTTGGGGT TAAGTCGTTT GGACTCATCA ATTATTTTCG AACAGTTATC CATGGGGTGC
ACTGCCACCA CGGCCATGAT GACTATTCAC AATATGGCGA CCTGGATGAT CGCAAAATGG
GGCAAACCAG CATTAAAAGC CAAGTGGTGC CCCGATTTGG TCACAGGTAA ATTACTGGCG
TCATATTGCT TAACAGAGCC AGGTTCTGGC TCAGATGCCG CAGCACTTCG AACCAGTGCC
AAGTTGGACG GCGATGATTA TGTGCTTAAC GGCTCGAAAA TGTTTATCTC AGGCGCGGGT
GAAACCGATG TGTTAGTGGT GATGGCTCGC ACCGGCGGAG AAGGCCCTAA AGGGATATCT
GCGTTTTTAG TGCCAGCAGA TGCACAAGGT ATCACTTATG GCAAAGCGGA AGAAAAAATG
GGCTGGAATG CGCAGCCCAC GCGCTTAATT ACGTTTGATA ATGTGCGCGT CAGTCACATC
AATTTGCTTG GGGATGAAGG CCAAGGCTTT AGTTTCGCTA TGCAAGGTTT AGATGGTGGC
CGAGTCAACA TTGCGACATG CTCCATCGGT ACTGCTCAGC AGGCTCTGAA TACCGCTACC
GCTTACATGA AAGAGCGTAC GCAATTCGGT AAGCCACTCG CTGCCTTTCA AGCATTGCAA
TTTAAACTCG CAGATATGGC AACCGAACTG GTCGCGGCCC GTCAGATGGT GCGCCTAGCT
GCGTTTAAAT TGGACAATAA AGACCCTGAG CGCAGTGCTT ATTGTGCCAT GGCAAAACGT
TTTGCCACCG ATATTGGCTT TGAAGTGTGT AATCAAGCCC TGCAAATTCA TGGTGGCTAC
GGCTACATTC AAGAATACCC ATTAGAGCGT CATGTACGTG ATGTGCGGGT ACATCAAATT
CTGGAAGGAA CTAATGAGAT TATGCGCATG ATTGTGGGTC GACGTCTTTT GGCGGACGAC
GCCGGGAGCA TACTGTAG
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| Protein sequence | MNFDLSEDQQ AFADTARQFA EQALAPNAAK WDKEHHFPKD VIQQAGELGF CGLYTSEEDG
GLGLSRLDSS IIFEQLSMGC TATTAMMTIH NMATWMIAKW GKPALKAKWC PDLVTGKLLA
SYCLTEPGSG SDAAALRTSA KLDGDDYVLN GSKMFISGAG ETDVLVVMAR TGGEGPKGIS
AFLVPADAQG ITYGKAEEKM GWNAQPTRLI TFDNVRVSHI NLLGDEGQGF SFAMQGLDGG
RVNIATCSIG TAQQALNTAT AYMKERTQFG KPLAAFQALQ FKLADMATEL VAARQMVRLA
AFKLDNKDPE RSAYCAMAKR FATDIGFEVC NQALQIHGGY GYIQEYPLER HVRDVRVHQI
LEGTNEIMRM IVGRRLLADD AGSIL
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