Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0936 |
Symbol | |
ID | 4172143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1118029 |
End bp | 1119081 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638053937 |
Product | putative FecR |
Protein accession | YP_660516 |
Protein GI | 109897261 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGG TAGTTAAATT TCCGAATGAT AAAAAAAGAG TGAAGCGCGA AGCAAGTGAA TGGATAGCCC GTATGGAGCA AGATGAACTT ACAGCCTCAG ATAAAACTGA ATTAAATGCA TGGCTCGCAA TAAGCCCCGA ACATGAAAAA CAGCTAAAGC GACTTGCGCA GTTATGGGAC AAAATGTCAG AAATAGGTGA GCGCTCATCA CTTCAAGAGC AATCAACTGA GAAACACAAA AAATATTCTC TTTTTGGCCA CAGACTTGCT CAACTTTCAT ATAAAACAGC GGCCTTTGCA GCATTGGTGT TGGCGATTCC AATTATTTTT TATTTGCAGG GCTCGCTAGA GAACTCCTCG AAAAATGGCC AGTACTTTAC AAAAATTGGG GAGCAAAAAA ATATAATTCT CACCGATGGT TCAGAGCTTT TATTAAACAC CAATAGTATT GTTGAAGTGA ATTACACTCG CAAGCAACGA AATATTACTC TTTTTCAGGG AGAAGCTAAT TTCGGCGTAG CTCGTGATAA AAGCAGGCCT TTCACCGTAA AAGCAGGAAC AGGGGATGTT CGCGCATTAG GTACCAACTT TTCAGTGCGT CTTAAGGGCA ATTTGGTCAA TGTTTTAGTA TCTCATGGAA CGGTAAGAGT TAGAGCGAAT GAAAATATTG ATGCAACTCA TCACGCAGAC AACTTTGCTC ATAAAGACAA AAACCAAGTC ATTGTTAGTG CGGGTAATAA CGTGGTATTT GATGACATTG AAGTCGAGTC TGTTGAACAA GTAAGCGATG AATCTATTGC GAAAAAACTC TATTGGAGGA AAGGCTTTCT GTCTTTCGAT GATGAACCAC TATCGGATGT GGTAGCTGAA TTATCGCGTT ACACCAACCT AAATATTGTT ATTGCAGACA AATCAATACA AGCGATGAAA GTGGGAGGAT TTTACCCTAT CGATAATCTC GAAACAGTTT TCACTACATT GGAATTAAAT CTTGGTTTGC ACGTTAAAAA AATGAGTGGT GGGTATTACT ACATAACGAA TCCAAACAGC TAA
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Protein sequence | MTQVVKFPND KKRVKREASE WIARMEQDEL TASDKTELNA WLAISPEHEK QLKRLAQLWD KMSEIGERSS LQEQSTEKHK KYSLFGHRLA QLSYKTAAFA ALVLAIPIIF YLQGSLENSS KNGQYFTKIG EQKNIILTDG SELLLNTNSI VEVNYTRKQR NITLFQGEAN FGVARDKSRP FTVKAGTGDV RALGTNFSVR LKGNLVNVLV SHGTVRVRAN ENIDATHHAD NFAHKDKNQV IVSAGNNVVF DDIEVESVEQ VSDESIAKKL YWRKGFLSFD DEPLSDVVAE LSRYTNLNIV IADKSIQAMK VGGFYPIDNL ETVFTTLELN LGLHVKKMSG GYYYITNPNS
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