| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0899 |
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| Symbol | |
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| ID | 4172945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1071159 |
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| End bp | 1071809 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638053900 |
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| Product | KDPG and KHG aldolase |
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| Protein accession | YP_660479 |
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| Protein GI | 109897224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCAA TGACATTACA AGCCGCCATG AATGCACTGC CACTGGTTGC TATTTTACGT
GGGATCACCC CAGATGAAGT CATCCCAGTG GCCAGAGCAT TGAAAGCTGA AGGGTTTAAT
ATTATTGAGG TACCGCTCAA TTCACCTCAA CCCTTAGAAA GCATTAAGCG CTTAGTCGAG
GTCTTTGGTG ATGAGTTGAT TATCGGCGCA GGCACTGTTT TAAGCTGCGC GCAGGTTGAC
CAAGTTCAGG CTGTGGGTGG TCGCATTATT ATTTCACCCA ATGTTAACGC CGATGTTATA
CGCCATGCAA AAGCCAAAGG TCTGTATTCA GTGCCTGGTT TTTACACGGT ATCAGAAGCG
TTTAGCGCCA TTGAGGCGGG GGCCGATGGG ATAAAGCTCT TCCCGGCTGA TACGCTAGGG
GCTGCAGGCC TTAAGGGCAT GATGGCCGTG TTACCCAAAG ACGTACCCGT GTTACCTGTA
GGCGGTGTAT CAAATGAAAC CATGAGTGGC TTTGTTGACG TTGGCGCGGG TGGTTTTGGT
TTGGGCTCAG GCTTATATAA AGCCGGCATG ACTGTGGAGC AAGTCACTGA AAATGCTCAA
GGGTATGTAC GTGCATGTCG CGCGGCGCAG GCCAAAACGA AGGGCAATTA A
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| Protein sequence | MSSMTLQAAM NALPLVAILR GITPDEVIPV ARALKAEGFN IIEVPLNSPQ PLESIKRLVE
VFGDELIIGA GTVLSCAQVD QVQAVGGRII ISPNVNADVI RHAKAKGLYS VPGFYTVSEA
FSAIEAGADG IKLFPADTLG AAGLKGMMAV LPKDVPVLPV GGVSNETMSG FVDVGAGGFG
LGSGLYKAGM TVEQVTENAQ GYVRACRAAQ AKTKGN
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